Evidence map›Paper›PMID 23573236›Full record

ArticlePloS one2013

The deoxyhypusine synthase mutant dys1-1 reveals the association of eIF5A and Asc1 with cell wall integrity.

Fabio Carrilho Galvão, Danuza Rossi, Wagner da Silva Silveira, Sandro Roberto Valentini, Cleslei Fernando Zanelli

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Validation ofPeerJ · 2019
    Article
  5. Article
  6. Article
  7. Differential gene expression in Aspergillus fumigatus induced by human platelets in vitro.International journal of medical microbiology : IJMM · 2015
    Article
  8. Article
  9. Review
  10. The hypusine-containing translation factor eIF5A.Critical reviews in biochemistry and molecular biology
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Fabio Carrilho GalvãoDepartment of Biological Sciences, Univ Estadual Paulista - UNESP, Araraquara-Saõ Paulo, Brazil.
Danuza Rossi
Wagner da Silva Silveira
Sandro Roberto Valentini
Cleslei Fernando Zanelli
Universidade Estadual Paulista (Unesp) · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The putative eukaryotic translation initiation factor 5A (eIF5A) is a highly conserved protein among archaea and eukaryotes that has recently been implicated in the elongation step of translation. eIF5A undergoes an essential and conserved posttranslational modification at a specific lysine to generate the residue hypusine. The enzymes deoxyhypusine synthase (Dys1) and deoxyhypusine hydroxylase (Lia1) catalyze this two-step modification process. Although several Saccharomyces cerevisiae eIF5A mutants have importantly contributed to the study of eIF5A function, no conditional mutant of Dys1 has been described so far. In this study, we generated and characterized the dys1-1 mutant, which showed a strong depletion of mutated Dys1 protein, resulting in more than 2-fold decrease in hypusine levels relative to the wild type. The dys1-1 mutant demonstrated a defect in total protein synthesis, a defect in polysome profile indicative of a translation elongation defect and a reduced association of eIF5A with polysomes. The growth phenotype of dys1-1 mutant is severe, growing only in the presence of 1 M sorbitol, an osmotic stabilizer. Although this phenotype is characteristic of Pkc1 cell wall integrity mutants, the sorbitol requirement from dys1-1 is not associated with cell lysis. We observed that the dys1-1 genetically interacts with the sole yeast protein kinase C (Pkc1) and Asc1, a component of the 40S ribosomal subunit. The dys1-1 mutant was synthetically lethal in combination with asc1Δ and overexpression of TIF51A (eIF5A) or DYS1 is toxic for an asc1Δ strain. Moreover, eIF5A is more associated with translating ribosomes in the absence of Asc1 in the cell. Finally, analysis of the sensitivity to cell wall-perturbing compounds revealed a more similar behavior of the dys1-1 and asc1Δ mutants in comparison with the pkc1Δ mutant. These data suggest a correlated role for eIF5A and Asc1 in coordinating the translational control of a subset of mRNAs associated with cell integrity.

Indexed as

Adaptor Proteins, Signal TransducingCell WallEpistasis, GeneticEukaryotic Translation Initiation Factor 5AGene Expression Regulation, FungalGTP-Binding ProteinsLysineMutation, MissenseOxidoreductases Acting on CH-NH Group DonorsPeptide Chain Elongation, TranslationalPeptide Initiation FactorsPolyribosomesProtein BindingProtein Kinase CRibosome Subunits, Small, EukaryoticRNA-Binding ProteinsAdaptor Proteins, Signal TransducingASC1 protein, S cerevisiaedeoxyhypusine synthaseEukaryotic Translation Initiation Factor 5AGTP-Binding ProteinshypusineLysineOxidoreductases Acting on CH-NH Group DonorsPeptide Initiation FactorsPKC1 protein, S cerevisiaeProtein Kinase CRNA-Binding ProteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID23573236
PMCPMC3613415
OpenAlexW2132399286

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.