Evidence map›Paper›PMID 23572080›Full record

ArticleThe EMBO journal2013

Distinct roles for Sir2 and RNAi in centromeric heterochromatin nucleation, spreading and maintenance.

Alessia Buscaino, Erwan Lejeune, Pauline Audergon, Georgina Hamilton, Alison Pidoux, Robin C Allshire

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
16.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 84 citations in OpenAlex.

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  7. Identification of an active RNAi pathway inProceedings of the National Academy of Sciences of the United States of America · 2024
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  9. Rex1BD and the 14-3-3 protein control heterochromatin organization at tandem repeats by linking RNAi and HDAC.Proceedings of the National Academy of Sciences of the United States of America · 2023
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Alessia BuscainoWellcome Trust Centre for Cell Biology, Institute of Cell Biology, School of Biological Sciences, The University of Edinburgh, Edinburgh, UK.
Erwan Lejeune
Pauline Audergon
Georgina Hamilton
Alison Pidoux
Robin C Allshire
Wellcome Centre for Cell Biology · GBUniversity of Edinburgh · GB

Funding

Wellcome Trust 065061Wellcome Trust 065061/Z/01/AWellcome Trust 092076Wellcome Trust 092076/Z/10/ZWellcome Trust 093852/Z/10/ZWellcome Trust 095021Wellcome Trust 095021/Z/10/Z
6 · The paper itself

Abstract

Epigenetically regulated heterochromatin domains govern essential cellular activities. A key feature of heterochromatin domains is the presence of hypoacetylated nucleosomes, which are methylated on lysine 9 of histone H3 (H3K9me). Here, we investigate the requirements for establishment, spreading and maintenance of heterochromatin using fission yeast centromeres as a paradigm. We show that establishment of heterochromatin on centromeric repeats is initiated at modular 'nucleation sites' by RNA interference (RNAi), ensuring the mitotic stability of centromere-bearing minichromosomes. We demonstrate that the histone deacetylases Sir2 and Clr3 and the chromodomain protein Swi6(HP1) are required for H3K9me spreading from nucleation sites, thus allowing formation of extended heterochromatin domains. We discovered that RNAi and Sir2 along with Swi6(HP1) operate in two independent pathways to maintain heterochromatin. Finally, we demonstrate that tethering of Sir2 is pivotal to the maintenance of heterochromatin at an ectopic locus in the absence of RNAi. These analyses reveal that Sir2, together with RNAi, are sufficient to ensure heterochromatin integrity and provide evidence for sequential establishment, spreading and maintenance steps in the assembly of centromeric heterochromatin.

Indexed as

CentromereChromatin Assembly and DisassemblyEpigenesis, GeneticHeterochromatinHistone DeacetylasesHistonesMethyltransferasesModels, BiologicalOrganisms, Genetically ModifiedProtein Processing, Post-TranslationalRegulatory Elements, TranscriptionalRNA InterferenceSchizosaccharomycesSchizosaccharomyces pombe ProteinsHeterochromatinHistone DeacetylasesHistonesMethyltransferasesSchizosaccharomyces pombe Proteinssir2 protein, S pombe

Identifiers

PMID23572080
PMCPMC3642681
OpenAlexW2102985318

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.