Evidence map›Paper›PMID 23571120›Full record

ReviewCurrent opinion in neurobiology2013

A circadian clock nanomachine that runs without transcription or translation.

Martin Egli, Carl Hirschie Johnson

Abstract readReview
In one paragraph

Review in Current opinion in neurobiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Molecular Interactions between Pathogens and the Circadian Clock.International journal of molecular sciences · 2019
    Review
  3. Article
  4. Article
  5. Article
  6. Timing the day: what makes bacterial clocks tick?Nature reviews. Microbiology · 2017
    Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Martin EgliDepartment of Biochemistry, Vanderbilt University, School of Medicine, Nashville, TN 37232, USA. Electronic address: martin.egli@vanderbilt.edu.
Carl Hirschie Johnson

Funding

Circadian Programs in BacteriaR37GM067152 · NIGMS · VANDERBILT UNIVERSITY · PI JOHNSON, CARL HIRSCHIE · 2015 to 2024
$4.1M
Regulation and Significance of Sustained Circadian OscillationsR01GM107434 · NIGMS · VANDERBILT UNIVERSITY · PI JOHNSON, CARL HIRSCHIE · 2013 to 2024
$4.0M
Circadian Programs in BacteriaR01GM067152 · NIGMS · VANDERBILT UNIVERSITY · PI JOHNSON, CARL HIRSCHIE · 2003 to 2014
$3.9M
Structural basis for the assembly of the Sec translocase machineryR01GM073854 · NIGMS · UNIVERSITY OF MINNESOTA · PI KALODIMOS, CHARALAMPOS · 2007 to 2016
$3.1M
Structural Biology of the S. elongatus Circadian ClockR01GM073845 · NIGMS · VANDERBILT UNIVERSITY · PI EGLI, MARTIN · 2006 to 2013
$2.4M
Experimental Evolution of Circadian OscillatorsR01GM088595 · NIGMS · VANDERBILT UNIVERSITY · PI JOHNSON, CARL HIRSCHIE · 2009 to 2012
$1.2M
NIGMS NIH HHS R01 GM067152NIGMS NIH HHS R01 GM073845NIGMS NIH HHS R01 GM073854NIGMS NIH HHS R01 GM088595NIGMS NIH HHS R01 GM107434NIGMS NIH HHS R37 GM067152
6 · The paper itself

Abstract

The biochemical basis of circadian timekeeping is best characterized in cyanobacteria. The structures of its key molecular players, KaiA, KaiB, and KaiC are known and these proteins can reconstitute a remarkable circadian oscillation in a test tube. KaiC is rhythmically phosphorylated and its phospho-status is a marker of circadian phase that regulates ATPase activity and the oscillating assembly of a nanomachine. Analyses of the nanomachines have revealed how their timing circuit is ratcheted to be unidirectional and how they stay in synch to ensure a robust oscillator. These insights are likely to elucidate circadian timekeeping in higher organisms, including how transcription and translation could appear to be a core circadian timer when the true pacemaker is an embedded biochemical oscillator.

Indexed as

Bacterial Physiological PhenomenaNanomedicineAnimalsBacterial ProteinsCircadian ClocksCircadian RhythmCyanobacteriaBacterial Proteins

Identifiers

PMID23571120
PMCPMC3735861

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.