Evidence map›Paper›PMID 23569734›Full record

ArticleAsian Pacific journal of tropical biomedicine2011

Diagnosis of Mycobacterium tuberculosis using molecular biology technology.

Juan Garberi, Jorge Labrador, Federico Garberi, Juan Ezequiel Garberi, Julian Peneipil, Miguel Garberi, Luis Scigliano, Alcides Troncoso

Open access · bronzeAbstract readEvaluation Study
In one paragraph

Article in Asian Pacific journal of tropical biomedicine, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.4field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 26 citations in OpenAlex.

  1. Hsp16.3 of mycobacterium tuberculosis in exosomes as a biomarker of tuberculosis.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2021
    Article
  2. Article
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  5. Fluoromycobacteriophages Can Detect ViableFrontiers in microbiology · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Juan GarberiLaboratory of Molecular Biology and Pathology, School of Medicine, Buenos Aires University, Argentina.
Jorge Labrador
Federico Garberi
Juan Ezequiel Garberi
Julian Peneipil
Miguel Garberi
Luis Scigliano
Alcides Troncoso
University of Buenos Aires · AR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveTo present an integrated molecular biology dedicated system for tuberculosis diagnosis.

methodsOne hundred and five sputum specimens from patients strongly suspected by clinical parameters of tuberculosis were studied by Ziehl-Neelsen staining, by cultivation on solid medium and by a balanced heminested fluorometric PCR system (Orange G3TB) that could preserve worker safety and produce a rather pure material free of potential inhibitors. DNA amplification was performed in a low cost tuberculosis termocycler-fluorometer. Produced double stranded DNA was flurometrically detected. The whole reaction was conducted in one single tube which would not be opened after adding the processed sample in order to minimize the risk of cross contamination with amplicons.

resultsThe assay was able to detect 30 bacillus per sample mL with 99.8% interassay variation coefficient. PCR was positive in 23 (21.9%) tested samples (21 of them were smear negative). In our study it showed a preliminary sensitivity of 94.5% for sputum and an overall specificity of 98.7%.

conclusionsTotal run time of the test is 4 h with 2.5 real working time. All PCR positive samples are also positive by microbiological culture and clinical criteria. Results show that it could be a very useful tool to increase detection efficiency of tuberculosis disease in low bacilus load samples. Furthermore, its low cost and friendly using make it feasible to run in poor regions.

Indexed as

Diagnostic Tests, RoutineHumansMycobacterium tuberculosisPolymerase Chain ReactionSputumTuberculosisLow costMicrobiological cultureMolecular biology technologyMolecular diagnosisMycobacterium tuberculosisReal-time PCRSputumSputum sampleTuberculosis

Identifiers

PMID23569734
PMCPMC3609174
OpenAlexW1980598514

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.