Evidence map›Paper›PMID 23569254›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Optical control demonstrates switch-like PIP3 dynamics underlying the initiation of immune cell migration.

W K Ajith Karunarathne, Lopamudra Giri, Anilkumar K Patel, Kareenhalli V Venkatesh, N Gautam

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 65 citations in OpenAlex.

  1. Synergistic effect of PIPBiophysical journal · 2026
    Article
  2. Review
  3. Article
  4. Emergent eukaryotic directional sensing via receptor degradation and diffusion.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Optogenetics for light control of biological systems.Nature reviews. Methods primers · 2022
    Article
  14. Article
  15. Live Cell Imaging and Optogenetics-Based Assays for GPCR Activity.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  16. Remote Optogenetics Using Up/Down-Conversion Phosphors.Frontiers in molecular biosciences · 2021
    Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

W K Ajith KarunarathneDepartment of Anesthesiology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Lopamudra Giri
Anilkumar K Patel
Kareenhalli V Venkatesh
N Gautam
Indian Institute of Technology Bombay · INWashington University in St. Louis · US

Funding

SIGNALING IN LIVING CELLSR01GM069027 · NIGMS · WASHINGTON UNIVERSITY · PI GAUTAM, NARASIMHAN · 2004 to 2016
$3.2M
G PROTEIN SUBUNIT FUNCTIONR01GM080558 · NIGMS · WASHINGTON UNIVERSITY · PI GAUTAM, NARASIMHAN · 2008 to 2011
$1.8M
NIGMS NIH HHS GM069027NIGMS NIH HHS GM080558NIGMS NIH HHS R01 GM069027NIGMS NIH HHS R01 GM080558
6 · The paper itself

Abstract

There is a dearth of approaches to experimentally direct cell migration by continuously varying signal input to a single cell, evoking all possible migratory responses and quantitatively monitoring the cellular and molecular response dynamics. Here we used a visual blue opsin to recruit the endogenous G-protein network that mediates immune cell migration. Specific optical inputs to this optical trigger of signaling helped steer migration in all possible directions with precision. Spectrally selective imaging was used to monitor cell-wide phosphatidylinositol (3,4,5)-triphosphate (PIP3), cytoskeletal, and cellular dynamics. A switch-like PIP3 increase at the cell front and a decrease at the back were identified, underlying the decisive migratory response. Migration was initiated at the rapidly increasing switch stage of PIP3 dynamics. This result explains how a migratory cell filters background fluctuations in the intensity of an extracellular signal but responds by initiating directionally sensitive migration to a persistent signal gradient across the cell. A two-compartment computational model incorporating a localized activator that is antagonistic to a diffusible inhibitor was able to simulate the switch-like PIP3 response. It was also able simulate the slow dissipation of PIP3 on signal termination. The ability to independently apply similar signaling inputs to single cells detected two cell populations with distinct thresholds for migration initiation. Overall the optical approach here can be applied to understand G-protein-coupled receptor network control of other cell behaviors.

Indexed as

LightModels, BiologicalAnimalsCell LineCell MovementGTP-Binding ProteinsMicePhosphatidylinositol PhosphatesRod OpsinsSignal TransductionGTP-Binding Proteinsphosphatidylinositol 3,4,5-triphosphatePhosphatidylinositol PhosphatesRod Opsinsshort-wavelength opsin

Identifiers

PMID23569254
PMCPMC3637758
OpenAlexW2112200798

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.