Evidence map›Paper›PMID 23569210›Full record

ArticleThe Journal of biological chemistry2013

Inhibition of HIV-1 transcription and replication by a newly identified cyclin T1 splice variant.

Guozhen Gao, Xiaoyun Wu, Jieqiong Zhou, Mingfeng He, Johnny J He, Deyin Guo

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Guozhen GaoState Key Laboratory of Virology and Modern Virology Research Center, Wuhan University College of Life Sciences, 430072 Wuhan, China; Department of Microbiology and Immunology, Indiana University School of Medicine, Indianapolis, Indiana 46202.
Xiaoyun WuState Key Laboratory of Virology and Modern Virology Research Center, Wuhan University College of Life Sciences, 430072 Wuhan, China.
Jieqiong ZhouState Key Laboratory of Virology and Modern Virology Research Center, Wuhan University College of Life Sciences, 430072 Wuhan, China.
Mingfeng HeDepartment of Microbiology and Immunology, Indiana University School of Medicine, Indianapolis, Indiana 46202.
Johnny J HeDepartment of Microbiology and Immunology, Indiana University School of Medicine, Indianapolis, Indiana 46202; Center for AIDS Research, Indiana University School of Medicine, Indianapolis, Indiana 46202; University of North Texas Health Science Center, Fort Worth, Texas 76107. Electronic address: johnny.he@unthsc.edu.
Deyin GuoState Key Laboratory of Virology and Modern Virology Research Center, Wuhan University College of Life Sciences, 430072 Wuhan, China; Institute of Medical Virology, Wuhan University School of Medicine, 430071 Wuhan, China. Electronic address: dguo@whu.edu.cn.
Indiana University School of MedicineWuhan University · CNIndiana University – Purdue University Indianapolis · USWuhan Institute of Virology · CN

Funding

GFAP as a novel HIV/neuroAIDS biomarkerR01MH092673 · NIMH · UNIVERSITY OF NORTH TEXAS HLTH SCI CTR · PI HE, JOHNNY J · 2010 to 2014
$2.4M
Sam68 and HIV-1 replication control in astrocytesR01NS065785 · NINDS · UNIVERSITY OF NORTH TEXAS HLTH SCI CTR · PI HE, JOHNNY J · 2009 to 2013
$1.8M
NIMH NIH HHS R01 MH092673NIMH NIH HHS R01MH092673NINDS NIH HHS R01 NS065785NINDS NIH HHS R01NS065785
6 · The paper itself

Abstract

A variety of cellular factors participates in the HIV-1 life cycle. Among them is the well characterized cyclin T1 (CYCT1). CycT1 binds to cyclin-dependent kinase 9 (CDK9) and forms the positive transcription elongation factor-b (P-TEFb). P-TEFb is then recruited by HIV-1 TAT to the HIV-1 long terminal repeat (LTR) promoter and subsequently leads to phosphorylation of the C-terminal domain of RNA polymerase II (pol II), enhanced processivity of pol II, and transcription of a full-length HIV-1 RNA. In this study, we report the identification of a new CYCT1 splice variant, designated as CYCT1b, and accordingly we renamed CYCT1 as CYCT1a. CYCT1b was detected in several cell lines, including primary human CD4 T cells, and its expression was subject to cell cycle regulation. Similar to CYCT1a, CYCT1b was primarily localized in the nucleus. CYCT1b expression was found to be inversely correlated with HIV-1 gene expression and replication. This inverse correlation appeared to involve TAT transactivation, CDK9 binding, and subsequent recruitment of P-TEFb to the HIV-1 LTR promoter and pol II C-terminal domain phosphorylation. In agreement with these findings, CYCT1b expression led to direct inhibition of TAT-transactivated transcription of the HIV-1 LTR promoter. Taken together, these results show that the newly identified CYCT1b splice variant inhibits HIV-1 transcription and may provide new clues for the development of anti-HIV strategies.

Indexed as

Gene Expression Regulation, ViralTranscription, GeneticAlternative SplicingAmino Acid SequenceBase SequenceCyclin TGene Expression ProfilingHEK293 CellsHeLa CellsHIV-1HumansJurkat CellsMolecular Sequence DataOpen Reading FramesPhosphorylationProtein IsoformsCCNT1 protein, humanCyclin TProtein IsoformsRNA, Messengertat Gene Products, Human Immunodeficiency VirusCyclinsGene RegulationHIV-1HIV-1 TatRNA Polymerase IITranscription

Identifiers

PMID23569210
PMCPMC3656286
OpenAlexW2016199502

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.