Evidence map›Paper›PMID 23568471›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2013

Identification of novel anthrax toxin countermeasures using in silico methods.

Ting-Lan Chiu, Kimberly M Maize, Elizabeth A Amin

Open access · greenAbstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.4field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Ting-Lan ChiuDepartment of Medicinal Chemistry, College of Pharmacy, University of Minnesota, Minneapolis, MN, USA.
Kimberly M Maize
Elizabeth A Amin
University of Minnesota · US

Funding

Anthrax Toxin Lethal Factor Inhibition StudyR01AI083234 · NIAID · UNIVERSITY OF MINNESOTA · PI AMBROSE, ELIZABETH ANN · 2009 to 2012
$1.9M
NIAID NIH HHS R01 AI083234
6 · The paper itself

Abstract

Anthrax is an acute infectious disease caused by the spore-forming, gram-positive, rod-shaped bacterium Bacillus anthracis. The anthrax toxin lethal factor (LF) is the primary anthrax toxin component responsible for cytotoxicity and host death and has been a heavily researched target for design of postexposure therapeutics in the event of a bioterror attack. Various computer-aided drug design methodologies have proven useful for pinpointing new antianthrax drug scaffolds, optimizing existing leads and probes, and elucidating key mechanisms of action. We present a selection of in silico virtual screening protocols incorporating docking and scoring, shape-based searching, and pharmacophore mapping techniques to identify and prioritize small molecules with potential biological activity against LF. We also recommend screening parameters that have been shown to increase the accuracy and reliability of these computational results.

Indexed as

Anti-Bacterial AgentsAntigens, BacterialBacillus anthracisBacterial ToxinsComputational BiologyDrug Evaluation, PreclinicalUser-Computer Interfaceanthrax toxinAnti-Bacterial AgentsAntigens, BacterialBacterial Toxins

Identifiers

PMID23568471
PMCPMC4634872
OpenAlexW2414841239

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.