Evidence map›Paper›PMID 23567907›Full record

ArticleMutation research

Ku80-deleted cells are defective at base excision repair.

Han Li, Teresa Marple, Paul Hasty

Abstract read
In one paragraph

Article in Mutation research. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Han LiThe Department of Molecular Medicine, The University of Texas Health Science Center, San Antonio, TX 78245-3207, USA.
Teresa Marple
Paul Hasty
The University of Texas Health Science Center at San Antonio · USSpanish National Cancer Research Centre · ES

Funding

THE IMPACT OF CELLULAR DEFENSE ON THE ROLE OF Ku80 IN GENOME MAINTENANCE AND LONGP01AG017242 · NIA · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI VIJG, JAN · 1999 to 2023
$46.1M
Models for DNA repair and cell cycle control variantsU01ES011044 · NIEHS · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI VIJG, JAN · 2001 to 2006
$5.1M
XRCC5 MUTANT MICE AND CELL LINESR01CA076317 · NCI · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI HASTY, EDWARD PAUL · 1997 to 2005
$1.0M
NCI NIH HHS R01 CA076317NCI NIH HHS R01 CA76317-05A1NIA NIH HHS P01 AG017242NIA NIH HHS P01 AG17242NIEHS NIH HHS U01 ES011044NIEHS NIH HHS U01 ES11044
6 · The paper itself

Abstract

Ku80 forms a heterodimer with Ku70, called Ku, that repairs DNA double-strand breaks (DSBs) via the nonhomologous end joining (NHEJ) pathway. As a consequence of deleting NHEJ, Ku80-mutant cells are hypersensitive to agents that cause DNA DSBs like ionizing radiation. Here we show that Ku80 deletion also decreased resistance to ROS and alkylating agents that typically cause base lesions and single-strand breaks (SSBs). This is unusual since base excision repair (BER), not NHEJ, typically repairs these types of lesions. However, we show that deletion of another NHEJ protein, DNA ligase IV (Lig4), did not cause hypersensitivity to these agents. In addition, the ROS and alkylating agents did not induce γ-H2AX foci that are diagnostic of DSBs. Furthermore, deletion of Ku80, but not Lig4 or Ku70, reduced BER capacity. Ku80 deletion also impaired BER at the initial lesion recognition/strand scission step; thus, involvement of a DSB is unlikely. Therefore, our data suggests that Ku80 deletion impairs BER via a mechanism that does not repair DSBs.

Indexed as

Alkylating AgentsAnimalsAntigens, NuclearBase SequenceDNA-Binding ProteinsDNA Breaks, Double-StrandedDNA End-Joining RepairDNA GlycosylasesDNA Ligase ATPDNA LigasesDNA RepairDNA, Single-StrandedDose-Response Relationship, DrugFibroblastsHeLa CellsHumansAlkylating AgentsAntigens, NuclearDNA-Binding ProteinsDNA GlycosylasesDNA Ligase ATPDNA LigasesDNA, Single-StrandedHydrogen PeroxideKu AutoantigenLIG4 protein, humanMutagensoxoguanine glycosylase 1, humanParaquatReactive Oxygen SpeciesXrcc6 protein, humanXrcc6 protein, mouse

Identifiers

PMID23567907
PMCPMC3721509
OpenAlexW2011783467

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.