Evidence map›Paper›PMID 23567846›Full record

ArticleIranian biomedical journal2013

Expression analysis of RNA-binding motif gene on Y chromosome (RBMY) protein isoforms in testis tissue and a testicular germ cell cancer-derived cell line (NT2).

Mehdi Alikhani, Mehdi Sharifi Tabar, Shahab Mirshahvaladi, Abolfazl Kheimeh, Mohammad Ali Sadighi Gilani, Marjan Sabbaghian

Open access · greenAbstract read
In one paragraph

Article in Iranian biomedical journal, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact, top 87% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Genetics of the human Y chromosome and its association with male infertility.Reproductive biology and endocrinology : RB&E · 2018
    Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Mehdi AlikhaniDept. of Molecular Systems Biology at Cell Science Research Center, Royan Institute for Stem Cell Biology and Technology, ACECR, Tehran, Iran.
Mehdi Sharifi TabarDept. of Molecular Systems Biology at Cell Science Research Center, Royan Institute for Stem Cell Biology and Technology, ACECR, Tehran, Iran.
Shahab MirshahvaladiDept. of Molecular Systems Biology at Cell Science Research Center, Royan Institute for Stem Cell Biology and Technology, ACECR, Tehran, Iran.
Abolfazl KheimehAnimal Core Facility of Reproductive Biomedicine Research Center, Royan Institute for Biotechnology, ACECR, Tehran, Iran.
Mohammad Ali Sadighi GilaniDept. of Andrology at Reproductive Biomedicine Research Center, Royan Institute, ACECR, Tehran, Iran.
Marjan SabbaghianDept. of Andrology at Reproductive Biomedicine Research Center, Royan Institute, ACECR, Tehran, Iran.
Academic Center for Education, Culture and Research · IRRoyan Institute · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRNA-binding motif gene on Y chromosome (RBMY), a germ cell-specific nuclear protein, is known as a key factor in spermatogenesis and disorders associated with this protein have been recognized to be related to male infertility. Although it was suggested that this protein could have different functions during germ cell development, no studies have been conducted to uncover the mechanism of this potential function yet. Here, we analyzed the expression pattern of RBMY protein isoforms in testis compared to NT2, a testicular germ cell cancer-derived cell line, to test probability of differential expression of RBMY protein isoforms at different spermatogenesis stages.

methodsFull length and a segment of RBMY gene were cloned and expressed in E. coli. Anti-human RBMY antibody was produced in rabbit using the recombinant proteins as antigen. Western-blot and immunofluorescence were conducted for detection and comparison of RBMY protein isoforms.

resultsSelected segment of RBMY protein resulted in producing a mono-specific antibody. As results shows, only the longest isoform of RBMY was expressed at protein level in NT2 cell line, while three isoforms of this protein were detected in the whole testis lysate.

conclusionThe results imply that different alternative splicing may happen in testis cells and probably difference of RBMY function during spermatogenesis is due to the differential expression of RBMY protein isoforms. These results and further experiments on RBMY isoforms can help to obtain a better understanding of the function of this protein, which may increase our knowledge about spermatogenesis and causes of male infertility.

Indexed as

AntibodiesBlotting, WesternCell Line, TumorChromosomes, Human, YCloning, MolecularCodonFluorescent Antibody TechniqueHumansMaleNeoplasms, Germ Cell and EmbryonalNuclear ProteinsProtein IsoformsRecombinant ProteinsReproducibility of ResultsRNA-Binding ProteinsTesticular NeoplasmsAntibodiesCodonNuclear ProteinsProtein IsoformsRBMY1A1 protein, humanRecombinant ProteinsRNA-Binding ProteinsMale infertilityProtein isoformsSpermatogenesis

Identifiers

PMID23567846
PMCPMC3677681
OpenAlexW2141877752

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.