Evidence map›Paper›PMID 23565191›Full record

ArticlePloS one2013

SMA-MAP: a plasma protein panel for spinal muscular atrophy.

Dione T Kobayashi, Jing Shi, Laurie Stephen, Karri L Ballard, Ruth Dewey, James Mapes, Brett Chung, Kathleen McCarthy, Kathryn J Swoboda, Thomas O Crawford and 15 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Novel challenges in spinal muscular atrophy - How to screen and whom to treat?Annals of clinical and translational neurology · 2019
    Review
  14. Article
  15. Article
  16. Article
  17. Developing therapies for spinal muscular atrophy.Annals of the New York Academy of Sciences · 2016
    Review
  18. Baseline results of the NeuroNEXT spinal muscular atrophy infant biomarker study.Annals of clinical and translational neurology · 2016
    Article
  19. Article
  20. The Genetics of Spinal Muscular Atrophy: Progress and Challenges.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 8 institutions in 1 country.

Dione T KobayashiSpinal Muscular Atrophy Foundation, New York, New York, United States of America. dkobayashi@smafoundation.org
Jing Shi
Laurie Stephen
Karri L Ballard
Ruth Dewey
James Mapes
Brett Chung
Kathleen McCarthy
Kathryn J Swoboda
Thomas O Crawford
Rebecca Li
Thomas Plasterer
Cynthia Joyce
Biomarkers for Spinal Muscular Atrophy Study Group
Wendy K Chung
Petra Kaufmann
Basil T Darras
Richard S Finkel
Douglas M Sproule
William B Martens
Michael P McDermott
Darryl C De Vivo
Pediatric Neuromuscular Clinical Research Network
Michael G Walker
Karen S Chen
Research Network (United States) · USSpinal Muscular Atrophy Foundation · USMyriad Genetics · USBG Medicine (United States) · USJohns Hopkins University · USNew England Research Institutes · USUniversity of Utah · USWalker (United States) · US

Funding

SYNAPTIC MECHANISMS IN HIPPOCAMPAL EPILEPTOGENESISP30HD018655 · NICHD · CHILDREN'S HOSPITAL BOSTON · PI POMEROY, SCOTT LOREN · 1985 to 2015
$26.2M
Newborn screening for identification & prospective followup of infants with SMAR01HD069045 · NICHD · UNIVERSITY OF UTAH · PI SWOBODA, KATHRYN J. · 2011 to 2015
$4.3M
Therapeutic Opportunities in Spinal Muscular AtrophyR01HD054599 · NICHD · UNIVERSITY OF UTAH · PI SWOBODA, KATHRYN J. · 2007 to 2011
$1.5M
NICHD NIH HHS P30 HD018655NICHD NIH HHS R01 HD054599NICHD NIH HHS R01 HD069045
6 · The paper itself

Abstract

objectivesSpinal Muscular Atrophy (SMA) presents challenges in (i) monitoring disease activity and predicting progression, (ii) designing trials that allow rapid assessment of candidate therapies, and (iii) understanding molecular causes and consequences of the disease. Validated biomarkers of SMA motor and non-motor function would offer utility in addressing these challenges. Our objectives were (i) to discover additional markers from the Biomarkers for SMA (BforSMA) study using an immunoassay platform, and (ii) to validate the putative biomarkers in an independent cohort of SMA patients collected from a multi-site natural history study (NHS).

methodsBforSMA study plasma samples (N = 129) were analyzed by immunoassay to identify new analytes correlating to SMA motor function. These immunoassays included the strongest candidate biomarkers identified previously by chromatography. We selected 35 biomarkers to validate in an independent cohort SMA type 1, 2, and 3 samples (N = 158) from an SMA NHS. The putative biomarkers were tested for association to multiple motor scales and to pulmonary function, neurophysiology, strength, and quality of life measures. We implemented a Tobit model to predict SMA motor function scores.

results12 of the 35 putative SMA biomarkers were significantly associated (p<0.05) with motor function, with a 13(th) analyte being nearly significant. Several other analytes associated with non-motor SMA outcome measures. From these 35 biomarkers, 27 analytes were selected for inclusion in a commercial panel (SMA-MAP) for association with motor and other functional measures.

conclusionsDiscovery and validation using independent cohorts yielded a set of SMA biomarkers significantly associated with motor function and other measures of SMA disease activity. A commercial SMA-MAP biomarker panel was generated for further testing in other SMA collections and interventional trials. Future work includes evaluating the panel in other neuromuscular diseases, for pharmacodynamic responsiveness to experimental SMA therapies, and for predicting functional changes over time in SMA patients.

Indexed as

Blood ProteinsAdolescentAdultBiomarkersChildChild, PreschoolHumansInfantMass SpectrometryMiddle AgedMotor ActivityMuscular Atrophy, SpinalPrognosisProteomicsReagent Kits, DiagnosticReproducibility of ResultsBiomarkersBlood ProteinsReagent Kits, Diagnostic

Identifiers

PMID23565191
PMCPMC3615018
OpenAlexW1987825231

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.