ArticlePloS one2013
Massive sorghum collection genotyped with SSR markers to enhance use of global genetic resources.
Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.
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Who cites it
31 citing papers in PubMed.
- Transpiration responds linearly to Penman-Monteith reference evapotranspiration and varies genetically, both in individual plants and canopies, in large sorghum and pearl millet panels.Plant phenomics (Washington, D.C.) · 2026Article
- Article
- Validation of sorghum quality control (QC) markers across African breeding lines.The plant genome · 2024Article
- Response of Sorghum bicolor genotypes for yield and yield components and organic carbon storage in the shoot and root systems.Scientific reports · 2024Article
- Direct evidence of plant consumption in Neolithic Eastern Sudan from dental calculus analysis.Scientific reports · 2024Article
- Linking genetic markers and crop model parameters using neural networks to enhance genomic prediction of integrative traits.Frontiers in plant science · 2024Article
- Genetic diversity and population structure of sorghum [Heliyon · 2023Article
- Exploring the sorghum race level diversity utilizing 272 sorghum accessions genomic resources.Frontiers in plant science · 2023Article
- Genome-wide screening of lectin putative genes from Sorghum bicolor L., distribution in QTLs and a probable implications of lectins in abiotic stress tolerance.BMC plant biology · 2022Article
- Review
- A genomics resource for genetics, physiology, and breeding of West African sorghum.The plant genome · 2021Article
- Genetic diversity for starch quality and alkali spreading value in sorghum.The plant genome · 2021Article
- The Road to Sorghum Domestication: Evidence From Nucleotide Diversity and Gene Expression Patterns.Frontiers in plant science · 2021Article
- Transcriptional Regulation of Sorghum Stem Composition: Key Players Identified Through Co-expression Gene Network and Comparative Genomics Analyses.Frontiers in plant science · 2020Article
- Article
- SpaTemHTP: A Data Analysis Pipeline for Efficient Processing and Utilization of Temporal High-Throughput Phenotyping Data.Frontiers in plant science · 2020Article
- Population structure of the NPGS Senegalese sorghum collection and its evaluation to identify new disease resistant genes.PloS one · 2018Article
- Phenotypic and molecular characterization of sweet sorghum accessions for bioenergy production.PloS one · 2017Article
- Sweet sorghum as biofuel feedstock: recent advances and available resources.Biotechnology for biofuels · 2017Review
- Transcriptomic Identification of Drought-Related Genes and SSR Markers in Sudan Grass Based on RNA-Seq.Frontiers in plant science · 2017Article
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17 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Large ex situ collections require approaches for sampling manageable amounts of germplasm for in-depth characterization and use. We present here a large diversity survey in sorghum with 3367 accessions and 41 reference nuclear SSR markers. Of 19 alleles on average per locus, the largest numbers of alleles were concentrated in central and eastern Africa. Cultivated sorghum appeared structured according to geographic regions and race within region. A total of 13 groups of variable size were distinguished. The peripheral groups in western Africa, southern Africa and eastern Asia were the most homogeneous and clearly differentiated. Except for Kafir, there was little correspondence between races and marker-based groups. Bicolor, Caudatum, Durra and Guinea types were each dispersed in three groups or more. Races should therefore better be referred to as morphotypes. Wild and weedy accessions were very diverse and scattered among cultivated samples, reinforcing the idea that large gene-flow exists between the different compartments. Our study provides an entry to global sorghum germplasm collections. Our reference marker kit can serve to aggregate additional studies and enhance international collaboration. We propose a core reference set in order to facilitate integrated phenotyping experiments towards refined functional understanding of sorghum diversity.
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