Evidence map›Paper›PMID 23564453›Full record

ArticleThe Journal of biological chemistry2013

Transcriptional and translational regulation of C/EBPβ-HDAC1 protein complexes controls different levels of p53, SIRT1, and PGC1α proteins at the early and late stages of liver cancer.

Jingling Jin, Polina Iakova, Yanjun Jiang, Kyle Lewis, Emily Sullivan, Nicole Jawanmardi, Lawrence Donehower, Lubov Timchenko, Nikolai A Timchenko

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 62 citations in OpenAlex.

  1. Trial
  2. Review
  3. Involvement of SIRT1-mediated aging in liver diseases.Frontiers in cell and developmental biology · 2025
    Review
  4. Review
  5. Epigenetic control of skeletal muscle atrophy.Cellular & molecular biology letters · 2024
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Endoplasmic Reticulum Stress-Induced CHOP Inhibits PGC-1α and Causes Mitochondrial Dysfunction in Diabetic Embryopathy.Toxicological sciences : an official journal of the Society of Toxicology · 2017
    Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Jingling JinHuffington Center on Aging and Department of Huffington Center on Aging and Departments of Pathology and Immunology, Virology, and Microbiology, Baylor College of Medicine, Houston, Texas 77030.
Polina IakovaHuffington Center on Aging and Department of Huffington Center on Aging and Departments of Pathology and Immunology, Virology, and Microbiology, Baylor College of Medicine, Houston, Texas 77030.
Yanjun JiangHuffington Center on Aging and Department of Huffington Center on Aging and Departments of Pathology and Immunology, Virology, and Microbiology, Baylor College of Medicine, Houston, Texas 77030.
Kyle LewisHuffington Center on Aging and Department of Huffington Center on Aging and Departments of Pathology and Immunology, Virology, and Microbiology, Baylor College of Medicine, Houston, Texas 77030.
Emily SullivanHuffington Center on Aging and Department of Huffington Center on Aging and Departments of Pathology and Immunology, Virology, and Microbiology, Baylor College of Medicine, Houston, Texas 77030.
Nicole JawanmardiHuffington Center on Aging and Department of Huffington Center on Aging and Departments of Pathology and Immunology, Virology, and Microbiology, Baylor College of Medicine, Houston, Texas 77030.
Lawrence DonehowerHuffington Center on Aging and Department of Huffington Center on Aging and Departments of Pathology and Immunology, Virology, and Microbiology, Baylor College of Medicine, Houston, Texas 77030.
Lubov TimchenkoDepartment of Molecular Physiology and Biophysics, Baylor College of Medicine, Houston, Texas 77030.
Nikolai A TimchenkoHuffington Center on Aging and Department of Huffington Center on Aging and Departments of Pathology and Immunology, Virology, and Microbiology, Baylor College of Medicine, Houston, Texas 77030. Electronic address: nikolait@bcm.tmc.edu.
Baylor College of Medicine · US

Funding

CELL &MOLECULAR BIOLOGY OF AGINGT32AG000183 · NIA · BAYLOR COLLEGE OF MEDICINE · PI DONEHOWER, LAWRENCE A. · 1989 to 2015
$3.7M
Regulation of Cell Growth by RNA Binding ProteinsR01CA100070 · NCI · BAYLOR COLLEGE OF MEDICINE · PI TIMCHENKO, NIKOLAI A. · 2003 to 2012
$2.6M
Role of Age in Liver CancerR01CA159942 · NCI · CINCINNATI CHILDRENS HOSP MED CTR · PI TIMCHENKO, NIKOLAI A. · 2011 to 2015
$1.6M
Molecular Mechanisms of Longevity in Long-Lived MiceR01AG028865 · NIA · BAYLOR COLLEGE OF MEDICINE · PI DARLINGTON, GRETCHEN J. · 2007 to 2011
$1.5M
Testing the role of chromatin in healthspanR21AG039885 · NIA · BAYLOR COLLEGE OF MEDICINE · PI TIMCHENKO, NIKOLAI A. · 2011 to 2012
$353k
NCI NIH HHS CA100070NCI NIH HHS CA159942NCI NIH HHS R01 CA100070NCI NIH HHS R01 CA159942NIA NIH HHS AG028865NIA NIH HHS AG039885NIA NIH HHS R01 AG028865NIA NIH HHS R21 AG039885NIA NIH HHS T32 AG000183NIGMS NIH HHS GM551888
6 · The paper itself

Abstract

Cancer changes biological processes in the liver by altering gene expression at the levels of transcription, translation, and protein modification. The RNA binding protein CUGBP1 is a key regulator of translation of CCAAT enhancer binding protein β and histone deacetylase 1 (HDAC1). These proteins form complexes that are involved in the regulation of liver biology. Here we show a critical role of the translational activation of CCAAT/enhancer binding protein β-HDAC1 complexes in the development of liver cancer mediated by diethylnitrosamine. We found that diethylnitrosamine increases the levels of CUGBP1 and activates CUGBP1 by phosphorylation, leading to the formation of the CUGBP1-eIF2 complex, which is an activator of translation of CUGBP1-dependent mRNAs. The elevation of the CUGBP1-eIF2 complex increases translation of C/EBPβ and HDAC1, resulting in an increase of C/EBPβ-HDAC1 complexes at later stages of liver cancer. We found that C/EBPβ-HDAC1 complexes repress promoters of three key regulators of liver functions: p53, SIRT1, and PGC1α. As the result of this suppression, the p53-, SIRT1-, and PGC1α-dependent downstream pathways are reduced, leading to increased liver proliferation. We also found that the proper regulation of C/EBPβ-HDAC1 complexes is required for the maintenance of biological levels of p53, SIRT1, and PGC1α in quiescent livers and at early stages of liver cancer. Taken together, these studies showed that the development of liver cancer includes a tight regulation of levels of C/EBPβ-HDAC1 complexes on the levels of transcription, translation, and posttranslational modifications.

Indexed as

AnimalsBase SequenceCCAAT-Enhancer-Binding Protein-betaCell ProliferationDiethylnitrosamineEpigenesis, GeneticGene Expression ProfilingGene Expression Regulation, NeoplasticHeat-Shock ProteinsHistone Deacetylase 1HumansLiver NeoplasmsMiceModels, BiologicalMolecular Sequence DataPeroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alphaCCAAT-Enhancer-Binding Protein-betaDiethylnitrosamineHDAC1 protein, humanHdac1 protein, mouseHeat-Shock ProteinsHistone Deacetylase 1Peroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alphaPPARGC1A protein, humanPpargc1a protein, mouseSIRT1 protein, humanSirt1 protein, mouseSirtuin 1TP53 protein, humanTrans-ActivatorsTranscription FactorsTumor Suppressor Protein p53CancerCancer Tumor PromoterC/EBPCell ProliferationChromatin Immunoprecipitation (ChIP)Cyclin-dependent Kinase (CDK)EpigeneticLiverTranslation

Identifiers

PMID23564453
PMCPMC3656300
OpenAlexW2130457965

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.