Evidence map›Paper›PMID 23563142›Full record

ArticleNature structural & molecular biology2013

Structural basis of signal sequence surveillance and selection by the SRP-FtsY complex.

Ottilie von Loeffelholz, Kèvin Knoops, Aileen Ariosa, Xin Zhang, Manikandan Karuppasamy, Karine Huard, Guy Schoehn, Imre Berger, Shu-ou Shan, Christiane Schaffitzel

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. The Blueprint of a Minimal Cell: MiniBacillus.Microbiology and molecular biology reviews : MMBR · 2016
    Review
  8. Article
  9. Regulation by a chaperone improves substrate selectivity during cotranslational protein targeting.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  10. Polyproteins in structural biology.Current opinion in structural biology · 2015
    Review
  11. Ribosome-SRP-FtsY cotranslational targeting complex in the closed state.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Ottilie von LoeffelholzEuropean Molecular Biology Laboratory, Grenoble Outstation, Grenoble, France.
Kèvin Knoops
Aileen Ariosa
Xin Zhang
Manikandan Karuppasamy
Karine Huard
Guy Schoehn
Imre Berger
Shu-ou Shan
Christiane Schaffitzel
California Institute of Technology · USEuropean Molecular Biology Laboratory · FRUnit of Virus Host Cell Interactions · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRUniversité Joseph Fourier · FR

Funding

PREDOCTORAL TRAINING IN BIOLOGY AND CHEMISTRYT32GM007616 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI STERNBERG, PAUL WARREN · 1985 to 2019
$22.9M
Molecular Mechanism of Protein Targeting by the Signal Recognition ParticleR01GM078024 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI SHAN, SHU-OU · 2007 to 2020
$4.4M
Interplay between the Signal Recognition Particle and Trigger Factor at the RibosF31GM095294 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI ARIOSA, AILEEN R. · 2011 to 2013
$123k
European Research Council 281331Howard Hughes Medical InstituteNIGMS NIH HHS 5T32GM07616NIGMS NIH HHS F31 GM095294NIGMS NIH HHS F31GM095294NIGMS NIH HHS R01 GM078024NIGMS NIH HHS T32 GM007616
6 · The paper itself

Abstract

Signal-recognition particle (SRP)-dependent targeting of translating ribosomes to membranes is a multistep quality-control process. Ribosomes that are translating weakly hydrophobic signal sequences can be rejected from the targeting reaction even after they are bound to the SRP. Here we show that the early complex, formed by Escherichia coli SRP and its receptor FtsY with ribosomes translating the incorrect cargo EspP, is unstable and rearranges inefficiently into subsequent conformational states, such that FtsY dissociation is favored over successful targeting. The N-terminal extension of EspP is responsible for these defects in the early targeting complex. The cryo-electron microscopy structure of this 'false' early complex with EspP revealed an ordered M domain of SRP protein Ffh making two ribosomal contacts, and the NG domains of Ffh and FtsY forming a distorted, flexible heterodimer. Our results provide a structural basis for SRP-mediated signal-sequence selection during recruitment of the SRP receptor.

Indexed as

Protein Sorting SignalsBacterial ProteinsCryoelectron MicroscopyEscherichia coliEscherichia coli ProteinsModels, MolecularMultiprotein ComplexesProtein ConformationReceptors, Cytoplasmic and NuclearSerine EndopeptidasesSignal Recognition ParticleBacterial ProteinsEscherichia coli ProteinsEspP protein, E coliFtsY protein, BacteriaMultiprotein ComplexesProtein Sorting SignalsReceptors, Cytoplasmic and NuclearSerine EndopeptidasesSignal Recognition Particle

Identifiers

PMID23563142
PMCPMC3874396
OpenAlexW1963745165

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.