Evidence map›Paper›PMID 23560066›Full record

ArticlePloS one2013

Specific gene bciD for C7-methyl oxidation in bacteriochlorophyll e biosynthesis of brown-colored green sulfur bacteria.

Jiro Harada, Tadashi Mizoguchi, Souichirou Satoh, Yusuke Tsukatani, Makio Yokono, Masato Noguchi, Ayumi Tanaka, Hitoshi Tamiaki

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Biosynthesis of the modified tetrapyrroles-the pigments of life.The Journal of biological chemistry · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Jiro HaradaDepartment of Medical Biochemistry, Kurume University School of Medicine, Kurume, Fukuoka, Japan. jiro_harada@med.kurume-u.ac.jp
Tadashi Mizoguchi
Souichirou Satoh
Yusuke Tsukatani
Makio Yokono
Masato Noguchi
Ayumi Tanaka
Hitoshi Tamiaki
Ritsumeikan University · JPHokkaido University · JPKurume University Medical Center · JPJapan Science and Technology Agency · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The gene named bciD, which encodes the enzyme involved in C7-formylation in bacteriochlorophyll e biosynthesis, was found and investigated by insertional inactivation in the brown-colored green sulfur bacterium Chlorobaculum limnaeum (previously called Chlorobium phaeobacteroides). The bciD mutant cells were green in color, and accumulated bacteriochlorophyll c homologs bearing the 7-methyl group, compared to C7-formylated BChl e homologs in the wild type. BChl-c homolog compositions in the mutant were further different from those in Chlorobaculum tepidum which originally produced BChl c: (3(1) S)-8-isobutyl-12-ethyl-BChl c was unusually predominant.

Indexed as

Bacterial ProteinsBacteriochlorophyllsChlorobiChlorobiumGene ExpressionMutagenesis, InsertionalBacterial Proteinsbacteriochlorophyll cbacteriochlorophyll eBacteriochlorophylls

Identifiers

PMID23560066
PMCPMC3613366
OpenAlexW2015379655

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.