Evidence map›Paper›PMID 23559582›Full record

ArticleJournal of the American Society of Nephrology : JASN2013

Renoprotective effect of combined inhibition of angiotensin-converting enzyme and histone deacetylase.

Yifei Zhong, Edward Y Chen, Ruijie Liu, Peter Y Chuang, Sandeep K Mallipattu, Christopher M Tan, Neil R Clark, Yueyi Deng, Paul E Klotman, Avi Ma'ayan and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of the American Society of Nephrology : JASN, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 61 citations in OpenAlex.

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  17. Integrative network and transcriptomics-based approach predicts genotype- specific drug combinations for melanoma.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Yifei ZhongDepartment of Medicine, Division of Nephrology, Mount Sinai School of Medicine, One Gustave L. Levy Place, Box 1243, New York, NY 10029, USA.
Edward Y Chen
Ruijie Liu
Peter Y Chuang
Sandeep K Mallipattu
Christopher M Tan
Neil R Clark
Yueyi Deng
Paul E Klotman
Avi Ma'ayan
John Cijiang He
Icahn School of Medicine at Mount Sinai · USLonghua Hospital Shanghai University of Traditional Chinese Medicine · CNBaylor College of Medicine · USJames J. Peters VA Medical Center · US

Funding

VIRAL PATHOGENESIS OF HIV ASSOCIATED NEPHROPATHYP01DK056492 · NIDDK · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI KLOTMAN, PAUL EVAN · 1999 to 2021
$27.8M
System Biology Center in New YorkP50GM071558 · NIGMS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI ZAPH, SUSANA NEVES · 2007 to 2017
$22.8M
Pharmaco Response Signatures and Disease MechanismU54HG006097 · NHGRI · HARVARD MEDICAL SCHOOL · PI MITCHISON, TIMOTHY J, SORGER, PETER KARL · 2010 to 2013
$9.7M
Role of HIPK2 in Kidney Tubulointerstitial InjuryR01DK088541 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI HE, JOHN CIJIANG · 2010 to 2019
$4.0M
Cellular and molecular mechanisms of retinoids in podocytesR01DK078897 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI HE, JOHN CIJIANG · 2007 to 2018
$3.6M
RNA profiling of HIV-associated nephropathy in patients with the MYH9 risk alleleRC4DK090860 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI KLOTMAN, PAUL EVAN · 2010 to 2010
$1.9M
Expression2Kinases: mRNA Profiling Linked to Multiple Upstream Regulatory LayersR01GM098316 · NIGMS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI MA'AYAN, AVI · 2012 to 2015
$1.3M
The role of SIRT1/FOXO4 pathway in podocyte apoptosis of diabetes mellitusK08DK082760 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI CHUANG, PETER YENLUNG · 2009 to 2013
$746k
Role of Protein S in early Diabetic Kidney DiseaseI01BX000345 · VA · JAMES J PETERS VA MEDICAL CENTER · PI HE, JOHN CIJIANG · 2009 to 2024
–
BLRD VA I01 BX000345NHGRI NIH HHS U54 HG006097NHGRI NIH HHS U54HG006097-02S1NIDDK NIH HHS 1R01DK078897NIDDK NIH HHS 1R01DK088541NIDDK NIH HHS 1RC4DK090860NIDDK NIH HHS 5K08DK082760NIDDK NIH HHS K08 DK082760NIDDK NIH HHS P01 DK056492NIDDK NIH HHS P01-DK-56492NIDDK NIH HHS R01 DK078897NIDDK NIH HHS R01 DK088541NIDDK NIH HHS R01DK088541NIDDK NIH HHS RC4 DK090860NIGMS NIH HHS P50 GM071558NIGMS NIH HHS P50GM071558NIGMS NIH HHS R01 GM098316NIGMS NIH HHS R01GM098316
6 · The paper itself

Abstract

The Connectivity Map database contains microarray signatures of gene expression derived from approximately 6000 experiments that examined the effects of approximately 1300 single drugs on several human cancer cell lines. We used these data to prioritize pairs of drugs expected to reverse the changes in gene expression observed in the kidneys of a mouse model of HIV-associated nephropathy (Tg26 mice). We predicted that the combination of an angiotensin-converting enzyme (ACE) inhibitor and a histone deacetylase inhibitor would maximally reverse the disease-associated expression of genes in the kidneys of these mice. Testing the combination of these inhibitors in Tg26 mice revealed an additive renoprotective effect, as suggested by reduction of proteinuria, improvement of renal function, and attenuation of kidney injury. Furthermore, we observed the predicted treatment-associated changes in the expression of selected genes and pathway components. In summary, these data suggest that the combination of an ACE inhibitor and a histone deacetylase inhibitor could have therapeutic potential for various kidney diseases. In addition, this study provides proof-of-concept that drug-induced expression signatures have potential use in predicting the effects of combination drug therapy.

Indexed as

Angiotensin-Converting Enzyme InhibitorsAnimalsBenzazepinesCell Line, TumorDrug SynergismDrug Therapy, CombinationGene Expression ProfilingHistone Deacetylase InhibitorsHumansHydroxamic AcidsKidneyKidney DiseasesMaleMiceVorinostatAngiotensin-Converting Enzyme InhibitorsbenazeprilBenzazepinesHistone Deacetylase InhibitorsHydroxamic AcidsVorinostat

Identifiers

PMID23559582
PMCPMC3636790
OpenAlexW2159282312

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.