Evidence map›Paper›PMID 23559249›Full record

ArticleScience (New York, N.Y.)2013

Drosophila H1 regulates the genetic activity of heterochromatin by recruitment of Su(var)3-9.

Xingwu Lu, Sandeep N Wontakal, Harsh Kavi, Byung Ju Kim, Paloma M Guzzardo, Alexander V Emelyanov, Na Xu, Gregory J Hannon, Jiri Zavadil, Dmitry V Fyodorov and 1 more

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
17.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 109 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Histone variant-specific post-translational modifications.Seminars in cell & developmental biology · 2023
    Review
  10. Article
  11. eLife · 2022
    Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Hinfp is a guardian of the somatic genome by repressing transposable elements.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  17. Review
  18. Article
  19. Article
  20. Article

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Xingwu LuDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, NY 10461, USA.
Sandeep N Wontakal
Harsh Kavi
Byung Ju Kim
Paloma M Guzzardo
Alexander V Emelyanov
Na Xu
Gregory J Hannon
Jiri Zavadil
Dmitry V Fyodorov
Arthur I Skoultchi
Albert Einstein College of Medicine · USCold Spring Harbor Laboratory · US

Funding

WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI THOMAS E ROHAN · 1985 to 2026
$111.2M
Chromatin Transitions during Early Embryonic Development in Drosophila melanogasterR01GM074233 · NIGMS · ALBERT EINSTEIN COL OF MED YESHIVA UNIV · PI FYODOROV, DMITRY V · 2005 to 2021
$5.8M
IN VIVO ANALYSIS OF MOUSE H1 HISTONE FUNCTIONR01CA079057 · NCI · YESHIVA UNIVERSITY · PI SKOULTCHI, ARTHUR I · 1998 to 2013
$5.4M
Roles of small RNAs in guarding germ cell genomesR37GM062534 · NIGMS · NEW YORK GENOME CENTER · PI HANNON, GREGORY J · 2013 to 2017
$2.0M
Drosophila Linker Histone H1 Functions in Chromosome Architecture and ActivityR01GM093190 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI SKOULTCHI, ARTHUR I · 2011 to 2014
$1.6M
In Vivo Analysis of Mouse H1 Histone FunctionR56CA079057 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI SKOULTCHI, ARTHUR I · 2008 to 2008
$250k
NCI NIH HHS 2P30CA13330NCI NIH HHS CA079057NCI NIH HHS P30 CA013330NCI NIH HHS R01 CA079057NCI NIH HHS R56 CA079057NIGMS NIH HHS 5T32GM0728NIGMS NIH HHS GM074233NIGMS NIH HHS GM093190NIGMS NIH HHS R01 GM074233NIGMS NIH HHS R01 GM093190NIGMS NIH HHS R37 GM062534
6 · The paper itself

Abstract

Eukaryotic genomes harbor transposable elements and other repetitive sequences that must be silenced. Small RNA interference pathways play a major role in their repression. Here, we reveal another mechanism for silencing these sequences in Drosophila. Depleting the linker histone H1 in vivo leads to strong activation of these elements. H1-mediated silencing occurs in combination with the heterochromatin-specific histone H3 lysine 9 methyltransferase Su(var)3-9. H1 physically interacts with Su(var)3-9 and recruits it to chromatin in vitro, which promotes H3 methylation. We propose that H1 plays a key role in silencing by tethering Su(var)3-9 to heterochromatin. The tethering function of H1 adds to its established role as a regulator of chromatin compaction and accessibility.

Indexed as

Gene SilencingAnimalsDrosophila melanogasterDrosophila ProteinsHeterochromatinHistonesMuscle ProteinsRepetitive Sequences, Nucleic AcidRepressor ProteinsRNA InterferenceTranscription FactorsDrosophila ProteinsHeterochromatinHistonesMuscle Proteinsnau protein, DrosophilaRepressor ProteinsSu(var)3-9 protein, DrosophilaTranscription Factors

Identifiers

PMID23559249
PMCPMC3756538
OpenAlexW2000392583

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.