Evidence map›Paper›PMID 23558556›Full record

ArticleImmunogenetics2013

IgH loci of American alligator and saltwater crocodile shed light on IgA evolution.

Susana Magadán-Mompó, Christian Sánchez-Espinel, Francisco Gambón-Deza

Open access · greenAbstract readComparative Study
PubMed Publisher
In one paragraph

Article in Immunogenetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 43 citations in OpenAlex.

  1. IMGTAntibodies (Basel, Switzerland) · 2026
    Review
  2. Review
  3. Review
  4. Comparative Analysis of theInternational journal of molecular sciences · 2022
    Article
  5. Deimination Protein Profiles inFrontiers in immunology · 2020
    Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Susana Magadán-MompóOceanographic Center of Vigo, Spanish Institute of Oceanography-IEO, Subida a Radio Faro 50, 36390 Vigo, Pontevedra, Spain.
Christian Sánchez-Espinel
Francisco Gambón-Deza
Servicio Gallego de Salud · ESUniversidade de Vigo · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Immunoglobulin loci of two representatives of the order Crocodylia were studied from full genome sequences. Both Alligator mississippiensis and Crocodylus porosus have 13 genes for the heavy chain constant regions of immunoglobulins. The IGHC locus contains genes encoding four immunoglobulins M (IgM), one immunoglobulin D (IgD), three immunoglobulins A (IgA), three immunoglobulins Y (IgY), and two immunoglobulins D2 (IgD2). IgA and IgD2 genes were found in reverse transcriptional orientation compared to the other Ig genes. The IGHD gene contains 11 exons, four of which containing stop codons or sequence alterations. As described in other reptiles, the IgD2 is a chimeric Ig with IgA- and IgD-related domains. This work clarifies the origin of bird IgA and its evolutionary relationship with amphibian immunoglobulin X (IgX) as well as their links with mammalian IgA.

Indexed as

Genes, ImmunoglobulinAlligators and CrocodilesAmino Acid SequenceAmphibiansAnimalsBase SequenceBirdsCodon, TerminatorConserved SequenceEvolution, MolecularExonsImmunoglobulin AImmunoglobulin Heavy ChainsImmunoglobulinsMammalsMolecular Sequence DataCodon, TerminatorImmunoglobulin AImmunoglobulin Heavy ChainsImmunoglobulins

Identifiers

PMID23558556
OpenAlexW2018888897

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.