Evidence map›Paper›PMID 23557020›Full record

ArticleAssay and drug development technologies2013

Assay development for histone methyltransferases.

Kurumi Y Horiuchi, Mia M Eason, Joseph J Ferry, Jamie L Planck, Colin P Walsh, Robert F Smith, Konrad T Howitz, Haiching Ma

Open access · greenAbstract read
In one paragraph

Article in Assay and drug development technologies, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 77 citations in OpenAlex.

  1. Article
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  4. PRPS2 enhances RNA mNature communications · 2025
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  5. Mechanisms and rationales of SAM homeostasis.Trends in biochemical sciences · 2025
    Review
  6. Review
  7. Review
  8. Article
  9. Ghost authors revealed: The structure and function of human NWiley interdisciplinary reviews. RNA · 2023
    Review
  10. Review
  11. Science advances · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Kurumi Y HoriuchiDepartment of Biochemistry, Reaction Biology Corporation, One Great Valley Parkway, Suite 2, Malvern, PA 19355, USA. kurumi.horiuchi@reactionbiology.com
Mia M Eason
Joseph J Ferry
Jamie L Planck
Colin P Walsh
Robert F Smith
Konrad T Howitz
Haiching Ma
Reaction Biology Corporation (United States) · US

Funding

Methyltransferase Drug DiscoveryR44CA139621 · NCI · REACTION BIOLOGY CORPORATION · PI MA, HAICHING · 2010 to 2011
$1.2M
NCI NIH HHS R44CA139621
6 · The paper itself

Abstract

Epigenetic modifications play a crucial role in human diseases. Unlike genetic mutations, however, they do not change the underlying DNA sequences. Epigenetic phenomena have gained increased attention in the field of cancer research, with many studies indicating that they are significantly involved in tumor establishment and progression. Histone methyltransferases (HMTs) are a large group of enzymes that specifically methylate protein lysine and arginine residues, especially in histones, using S-adenosyl-L-methionine (SAM) as the methyl donor. However, in general, HMTs have no widely accepted high-throughput screening (HTS) assay format, and reference inhibitors are not available for many of the enzymes. In this study, we describe the application of a miniaturized, radioisotope-based reaction system: the HotSpot(SM) platform for methyltransferases. Since this platform employs tritiated SAM as a cofactor, it can be applied to the assay of any HMT. The key advantage of this format is that any substrate can be used, including peptides, proteins, or even nucleosomes, without the need for labeling or any other modifications. Using this platform, we have determined substrate specificities, characterized enzyme kinetics, performed compound profiling for both lysine and arginine methyltransferases, and carried out HTS for a small-library LOPAC against DOT1L. After hit confirmation and profiling, we found that suramin inhibited DOT1L, NSD2, and PRMT4 with IC₅₀ values at a low μM range.

Indexed as

Drug DiscoveryEnzyme ActivationEnzyme AssaysHigh-Throughput Screening AssaysHistone-Lysine N-MethyltransferaseHistone MethyltransferasesProtein Interaction MappingSubstrate SpecificityHistone-Lysine N-MethyltransferaseHistone Methyltransferases

Identifiers

PMID23557020
PMCPMC3656627
OpenAlexW2121564159

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.