Evidence map›Paper›PMID 23555835›Full record

ArticlePloS one2013

Pyrosequencing reveals high-temperature cellulolytic microbial consortia in Great Boiling Spring after in situ lignocellulose enrichment.

Joseph P Peacock, Jessica K Cole, Senthil K Murugapiran, Jeremy A Dodsworth, Jenny C Fisher, Duane P Moser, Brian P Hedlund

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
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  3. Biochemical characterization of Fsa16295Glu fromFrontiers in microbiology · 2024
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  11. Novel Hyperthermophilic CrenarchaeonFrontiers in microbiology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Joseph P PeacockSchool of Life Sciences, University of Nevada, Las Vegas, Nevada, United States of America.
Jessica K Cole
Senthil K Murugapiran
Jeremy A Dodsworth
Jenny C Fisher
Duane P Moser
Brian P Hedlund

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To characterize high-temperature cellulolytic microbial communities, two lignocellulosic substrates, ammonia fiber-explosion-treated corn stover and aspen shavings, were incubated at average temperatures of 77 and 85°C in the sediment and water column of Great Boiling Spring, Nevada. Comparison of 109,941 quality-filtered 16S rRNA gene pyrosequences (pyrotags) from eight enrichments to 37,057 quality-filtered pyrotags from corresponding natural samples revealed distinct enriched communities dominated by phylotypes related to cellulolytic and hemicellulolytic Thermotoga and Dictyoglomus, cellulolytic and sugar-fermenting Desulfurococcales, and sugar-fermenting and hydrogenotrophic Archaeoglobales. Minor enriched populations included close relatives of hydrogenotrophic Thermodesulfobacteria, the candidate bacterial phylum OP9, and candidate archaeal groups C2 and DHVE3. Enrichment temperature was the major factor influencing community composition, with a negative correlation between temperature and richness, followed by lignocellulosic substrate composition. This study establishes the importance of these groups in the natural degradation of lignocellulose at high temperatures and suggests that a substantial portion of the diversity of thermophiles contributing to consortial cellulolysis may be contained within lineages that have representatives in pure culture.

Indexed as

Genes, ArchaealArchaeoglobalesBiodiversityDesulfurococcalesHot SpringsHot TemperatureLigninMicrobial ConsortiaNevadaPhylogenyPolysaccharidesRNA, Ribosomal, 16SSequence Analysis, DNATreesWaterWater MicrobiologyhemicelluloseLigninlignocellulosePolysaccharidesRNA, Ribosomal, 16SWater

Identifiers

PMID23555835
PMCPMC3612082

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.