Evidence map›Paper›PMID 23555720›Full record

ArticlePloS one2013

Single residues in the outer pore of TRPV1 and TRPV3 have temperature-dependent conformations.

Sung Eun Kim, Ardem Patapoutian, Jörg Grandl

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Protein dynamics underlies strong temperature dependence of heat receptors.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Review
  6. Article
  7. Pathogenesis and management ofFrontiers in genetics · 2024
    Review
  8. Article
  9. A suicidal mechanism for the exquisite temperature sensitivity of TRPV1.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  10. Article
  11. Article
  12. Article
  13. TRPV3: Structure, Diseases and Modulators.Molecules (Basel, Switzerland) · 2023
    Review
  14. Article
  15. Article
  16. Article
  17. Heat-dependent opening of TRPV1 in the presence of capsaicin.Nature structural & molecular biology · 2021
    Article
  18. Article
  19. Gating of human TRPV3 in a lipid bilayer.Nature structural & molecular biology · 2020
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Sung Eun KimDepartment of Molecular and Cellular Neuroscience, Dorris Neuroscience Center, The Scripps Research Institute, La Jolla, California, United States of America.
Ardem Patapoutian
Jörg Grandl

Funding

Molecular characterization of Sensory FunctionR01NS046303 · NINDS · SCRIPPS RESEARCH INSTITUTE, THE · PI PATAPOUTIAN, ARDEM · 2004 to 2013
$4.2M
Structure and Function of TRP ThermosensationF32NS062515 · NINDS · SCRIPPS RESEARCH INSTITUTE, THE · PI GRANDL, JORG · 2010 to 2011
$103k
NINDS NIH HHS R01 NS046303NINDS NIH HHS R01-NS046303
6 · The paper itself

Abstract

Thermosensation is mediated by ion channels that are highly temperature-sensitive. Several members of the family of transient receptor potential (TRP) ion channels are activated by cold or hot temperatures and have been shown to function as temperature sensors in vivo. The molecular mechanism of temperature-sensitivity of these ion channels is not understood. A number of domains or even single amino acids that regulate temperature-sensitivity have been identified in several TRP channels. However, it is unclear what precise conformational changes occur upon temperature activation. Here, we used the cysteine accessibility method to probe temperature-dependent conformations of single amino acids in TRP channels. We screened over 50 amino acids in the predicted outer pore domains of the heat-activated ion channels TRPV1 and TRPV3. In both ion channels we found residues that have temperature-dependent accessibilities to the extracellular solvent. The identified residues are located within the second predicted extracellular pore loop. These residues are identical or proximal to residues that were shown to be specifically required for temperature-activation, but not chemical activation. Our data precisely locate conformational changes upon temperature-activation within the outer pore domain. Collectively, this suggests that these specific residues and the second predicted pore loop in general are crucial for the temperature-activation mechanism of these heat-activated thermoTRPs.

Indexed as

Amino Acid SequenceAnimalsCysteineElectrophysiological PhenomenaExtracellular SpaceHEK293 CellsHumansMiceModels, MolecularMolecular Sequence DataPorosityProtein Structure, TertiaryRatsSolventsTemperatureTRPV Cation ChannelsCysteineSolventsTrpv1 protein, ratTrpv3 protein, mouseTRPV Cation Channels

Identifiers

PMID23555720
PMCPMC3608658

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.