Evidence map›Paper›PMID 23555185›Full record

ArticleNeoplasia (New York, N.Y.)2013

Methylation profiling defines an extensive field defect in histologically normal prostate tissues associated with prostate cancer.

Bing Yang, Sachin Bhusari, Jessica Kueck, Pushpa Weeratunga, Jennifer Wagner, Glen Leverson, Wei Huang, David F Jarrard

Open access · goldAbstract read
In one paragraph

Article in Neoplasia (New York, N.Y.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed, 1 pooled it
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 1 synthesis or guideline pooled it, 59 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Advances in spatial omics for the analysis of prostate cancer.Analytical and bioanalytical chemistry · 2026
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  17. Epigenetic field alterations in non-tumor prostate tissues detect prostate cancer in urine.American journal of clinical and experimental urology · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Bing YangUniversity of Wisconsin School of Medicine and Public Health, Madison, WI, USA.
Sachin Bhusari
Jessica Kueck
Pushpa Weeratunga
Jennifer Wagner
Glen Leverson
Wei Huang
David F Jarrard
University of Wisconsin–Madison · USUniversity of Wisconsin Carbone Cancer Center · US

Funding

MODULATION OF IGF-II IMPRINTING IN THE AGING PROSTATER01CA097131 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI JARRARD, DAVID F. · 2002 to 2013
$2.5M
NCI NIH HHS 2R01CA097131NCI NIH HHS R01 CA097131
6 · The paper itself

Abstract

Prostate cancer (PCa) is typically found as a multifocal disease suggesting the potential for molecular defects within the morphologically normal tissue. The frequency and spatial extent of DNA methylation changes encompassing a potential field defect are unknown. A comparison of non-tumor-associated (NTA) prostate to histologically indistinguishable tumor-associated (TA) prostate tissues detected a distinct profile of DNA methylation alterations (0.2%) using genome-wide DNA arrays based on the Encyclopedia of DNA Elements 18 sequence that tile both gene-rich and poor regions. Hypomethylation (87%) occurred more frequently than hypermethylation (13%). Several of the most significantly altered loci (CAV1, EVX1, MCF2L, and FGF1) were then used as probes to map the extent of these DNA methylation changes in normal tissues from prostates containing cancer. In TA tissues, the extent of methylation was similar both adjacent (2 mm) and at a distance (>1 cm) from tumor foci. These loci were also able to distinguish NTA from TA tissues in a validation set of patient samples. These mapping studies indicate that a spatially widespread epigenetic defect occurs in the peripheral prostate tissues of men who have PCa that may be useful in the detection of this disease.

Indexed as

DNA MethylationAgedAged, 80 and overCaveolin 1Epigenesis, GeneticFibroblast Growth Factor 1Gene ExpressionGuanine Nucleotide Exchange FactorsHomeodomain ProteinsHumansMaleMiddle AgedMolecular Diagnostic TechniquesProstateProstatic NeoplasmsRho Guanine Nucleotide Exchange FactorsCAV1 protein, humanCaveolin 1EVX1 protein, humanFibroblast Growth Factor 1Guanine Nucleotide Exchange FactorsHomeodomain ProteinsMCF2L protein, humanRho Guanine Nucleotide Exchange Factors

Identifiers

PMID23555185
PMCPMC3612912
OpenAlexW1933889532

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.