Evidence map›Paper›PMID 23554923›Full record

ArticlePloS one2013

Bartonella quintana deploys host and vector temperature-specific transcriptomes.

Stephanie Abromaitis, Christopher S Nelson, Domenic Previte, Kyong S Yoon, J Marshall Clark, Joseph L DeRisi, Jane E Koehler

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Iron Starvation Conditions UpregulateFrontiers in cellular and infection microbiology · 2017
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Stephanie AbromaitisMicrobial Pathogenesis and Host Defense Program, University of California San Francisco, San Francisco, California, USA.
Christopher S Nelson
Domenic Previte
Kyong S Yoon
J Marshall Clark
Joseph L DeRisi
Jane E Koehler

Funding

MECHANISMS OF BARTONELLA VIRULENCE IN AIDS PATIENTSR01AI052813 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KOEHLER, JANE E · 2003 to 2012
$4.6M
Functional and transcriptional profiling of lice defenses against pediculicidesR56AI081933 · NIAID · UNIVERSITY OF MASSACHUSETTS AMHERST · PI CLARK, JOHN MARSHALL · 2010 to 2010
$385k
Howard Hughes Medical InstituteNIAID NIH HHS 1R56AI081933-01A2NIAID NIH HHS R01 AI052813NIAID NIH HHS R01AI52813NIAID NIH HHS R56 AI081933PHS HHS T32A1007641
6 · The paper itself

Abstract

The bacterial pathogen Bartonella quintana is passed between humans by body lice. B. quintana has adapted to both the human host and body louse vector niches, producing persistent infection with high titer bacterial loads in both the host (up to 10(5) colony-forming units [CFU]/ml) and vector (more than 10(8) CFU/ml). Using a novel custom microarray platform, we analyzed bacterial transcription at temperatures corresponding to the host (37°C) and vector (28°C), to probe for temperature-specific and growth phase-specific transcriptomes. We observed that transcription of 7% (93 genes) of the B. quintana genome is modified in response to change in growth phase, and that 5% (68 genes) of the genome is temperature-responsive. Among these transcriptional changes in response to temperature shift and growth phase was the induction of known B. quintana virulence genes and several previously unannotated genes. Hemin binding proteins, secretion systems, response regulators, and genes for invasion and cell attachment were prominent among the differentially-regulated B. quintana genes. This study represents the first analysis of global transcriptional responses by B. quintana. In addition, the in vivo experiments provide novel insight into the B. quintana transcriptional program within the body louse environment. These data and approaches will facilitate study of the adaptation mechanisms employed by Bartonella during the transition between human host and arthropod vector.

Indexed as

TemperatureTranscriptomeAnimalsArthropod VectorsBartonella quintanaBase SequenceCluster AnalysisGene Expression ProfilingGene Expression Regulation, BacterialHost-Pathogen InteractionsHumansMolecular Sequence AnnotationNucleotide MotifsPromoter Regions, GeneticTranscription, GeneticVirulence

Identifiers

PMID23554923
PMCPMC3595295

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.