Evidence map›Paper›PMID 23554095›Full record

ArticleProteomics2013

Expression, purification and proteomic analysis of recombinant histone H4 acetylated at lysine 16.

Satish Kallappagoudar, Eric B Dammer, Duc Minh Duong, Nicholas T Seyfried, John C Lucchesi

Open access · greenAbstract read
In one paragraph

Article in Proteomics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Satish KallappagoudarDepartment of Biology, Emory University, Atlanta, GA 30322, USA.
Eric B Dammer
Duc Minh Duong
Nicholas T Seyfried
John C Lucchesi
Emory University · US

Funding

ENNCF - Viral Vector CoreP30NS055077 · NINDS · EMORY UNIVERSITY · PI LEVEY, ALLAN I · 2008 to 2018
$6.8M
GENETIC REGULATION IN DROSOPHILA: DOSAGE COMPENSATIONR01GM015691 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI LUCCHESI, JOHN · 1985 to 2012
$4.8M
NIGMS NIH HHS GM015691NIGMS NIH HHS R01 GM015691NINDS NIH HHS NS055077
6 · The paper itself

Abstract

Many histone covalent modifications have been identified and shown to play key regulatory roles in eukaryotic transcription, DNA damage repair, and replication. In vitro experiments designed to understand the mechanistic role of individual modifications require the availability of substantial quantities of pure histones, homogeneously modified at specific residues. We have applied the amber stop codon/suppressor tRNA strategy to the production of histone H4 acetylated at lysine 16, a particularly important isoform of this histone. Our success relies on adapting the H4 DNA sequence to the codon preference of E. coli and on preventing the premature decay of the H4 mRNA. These modifications to the original procedure render it easily applicable to the generation of any covalently modified histone H4 isoform.

Indexed as

Protein Processing, Post-TranslationalAcetylationAmino Acid SequenceBase SequenceCloning, MolecularCodon, TerminatorEscherichia coliHistonesHumansLysineMolecular Sequence DataProteomicsRecombinant ProteinsTandem Mass SpectrometryCodon, TerminatorHistonesLysineRecombinant Proteins

Identifiers

PMID23554095
PMCPMC3771349
OpenAlexW2114475204

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.