Evidence map›Paper›PMID 23553629›Full record

ArticleThe Journal of biological chemistry2013

The signal peptide of the tumor-shared antigen midkine hosts CD4+ T cell epitopes.

Jerome Kerzerho, Aurélie Schneider, Emmanuel Favry, Florence Anne Castelli, Bernard Maillère

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Prediction of Signal Peptides in Proteins from Malaria Parasites.International journal of molecular sciences · 2018
    Article
  5. Article
  6. The use of signal peptide domains as vaccine candidates.Human vaccines & immunotherapeutics · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Jerome KerzerhoCommissariat à l'Energie Atomique, iBiTecS, Service d'Ingénierie Moléculaire des Protéines (SIMOPRO), Labex LERMIT, Labex VRI, Gif Sur Yvette F-91191, France.
Aurélie Schneider
Emmanuel Favry
Florence Anne Castelli
Bernard Maillère
Commissariat à l'Énergie Atomique et aux Énergies Alternatives · FRInstitut de Recherche Vaccinale · FRLaboratoire d'Excellence en Recherche sur le Médicament et l'Innovation Thérapeutique

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe CD4 T cell response to the tumor antigen Midkine was unknown.

resultsMost of the T cell response to Midkine relies on T cell epitopes contained in its signal peptide.

conclusionThe signal peptide of Midkine is accessible to HLA class II pathway for CD4 T cell presentation. SIGNIFICANCE: It is a new function for signal peptides to contribute to tumor-specific CD4 T cell response. Because of the key role of CD4 T cell response in immunity to tumors, we investigated the CD4(+) T cell response to the recently identified tumor antigen Midkine (MDK). By weekly stimulations of T lymphocytes harvested from seven HLA-DR-typed healthy donors, we derived CD4(+) T cell lines specific for eight MDK peptides. Most of the T cell lines reacted with the peptides 9-23 and 14-28, located in and overlapping the MDK signal peptide, respectively. Accordingly, the MDK signal peptide appeared to be rich in good binders to common HLA-DR molecules. The peptide 9-23-specific T cell lines were specifically stimulated by autologous dendritic cells loaded with lysates of MDK-transfected cells or with lysates of tumor cells naturally expressing the MDK protein. One T cell line was stimulated by HLA-compatible MDK-transfected tumor cells. By contrast, the peptide 14-28-specific T cell lines were not stimulated in any of these conditions. Our data demonstrate that CD4(+) T cell epitopes present in the signal peptide can be accessible to recognition by CD4(+) T cells and may therefore contribute to tumor immunity, whereas a peptide overlapping the junction between the signal peptide and the mature protein is not.

Indexed as

Amino Acid SequenceAntigen PresentationAntigens, NeoplasmCD4-Positive T-LymphocytesCells, CulturedCytokinesDendritic CellsEpitopes, T-LymphocyteHep G2 CellsHLA-DR AntigensHumansMidkineMolecular Sequence DataNeoplasmsPeptide FragmentsProtein BindingAntigens, NeoplasmCytokinesEpitopes, T-LymphocyteHLA-DR AntigensMidkinePeptide FragmentsProtein Sorting SignalsAntigen PresentationEpitope MappingImmunologyMajor Histocompatibility Complex (MHC)T CellTumor Immunology

Identifiers

PMID23553629
PMCPMC3650375
OpenAlexW2046401246

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.