Evidence map›Paper›PMID 23550145›Full record

ArticleMobile genetic elements2012

Viral evolution: Primordial cellular origins and late adaptation to parasitism.

Arshan Nasir, Kyung Mo Kim, Gustavo Caetano-Anollés

Abstract read
In one paragraph

Article in Mobile genetic elements, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Studying the Evolution of Protein Structure One Superfamily at a Time.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  2. Article
  3. Pioneering role of RNA in the early evolution of life.Genetics and molecular biology · 2024
    Article
  4. Review
  5. Tale of Viruses in Male Infertility.Advances in experimental medicine and biology · 2022
    Article
  6. Review
  7. Article
  8. Review
  9. Review
  10. Review
  11. Article
  12. Postdigital Research in the Time of Covid-19.Postdigital science and education · 2020
    Article
  13. Covid-19: When Species and Data Meet.Postdigital science and education · 2020
    Article
  14. A Place for Viruses on the Tree of Life.Frontiers in microbiology · 2020
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Arshan NasirDepartment of Crop Science; University of Illinois at Urbana-Champaign; Urbana, IL USA ; Illinois Informatics Institute; University of Illinois at Urbana-Champaign; Urbana, IL USA.
Kyung Mo Kim
Gustavo Caetano-Anollés

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Explaining the origin of viruses remains an important challenge for evolutionary biology. Previous explanatory frameworks described viruses as founders of cellular life, as parasitic reductive products of ancient cellular organisms or as escapees of modern genomes. Each of these frameworks endow viruses with distinct molecular, cellular, dynamic and emergent properties that carry broad and important implications for many disciplines, including biology, ecology and epidemiology. In a recent genome-wide structural phylogenomic analysis, we have shown that large-to-medium-sized viruses coevolved with cellular ancestors and have chosen the evolutionary reductive route. Here we interpret these results and provide a parsimonious hypothesis for the origin of viruses that is supported by molecular data and objective evolutionary bioinformatic approaches. Results suggest two important phases in the evolution of viruses: (1) origin from primordial cells and coexistence with cellular ancestors, and (2) prolonged pressure of genome reduction and relatively late adaptation to the parasitic lifestyle once virions and diversified cellular life took over the planet. Under this evolutionary model, new viral lineages can evolve from existing cellular parasites and enhance the diversity of the world's virosphere.

Indexed as

giant virusesparasitismphylogenomicsprotein domainsreductive evolution

Identifiers

PMID23550145
PMCPMC3575434

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.