Evidence map›Paper›PMID 23549331›Full record

ArticleJournal of lipid research2013

A distal enhancer controls cytokine-dependent human cPLA2α gene expression.

Justin S Bickford, Dawn E Beachy, Kimberly J Newsom, Sarah J Barilovits, John-David H Herlihy, Xiaolei Qiu, Jewell N Walters, Ning Li, Harry S Nick

Open access · hybridAbstract read
In one paragraph

Article in Journal of lipid research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Phospholipases: Where Do We Stand?Methods in molecular biology (Clifton, N.J.) · 2027
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Justin S BickfordDepartment of Neuroscience, University of Florida, Gainesville, FL, USA.
Dawn E Beachy
Kimberly J Newsom
Sarah J Barilovits
John-David H Herlihy
Xiaolei Qiu
Jewell N Walters
Ning Li
Harry S Nick
University of Florida · US

Funding

Regulation Of Cytosolic Phospholipase A2 In The LungR37HL067456 · NHLBI · UNIVERSITY OF FLORIDA · PI NICK, HARRY S · 2002 to 2010
$3.1M
REGULATION OF SUPEROXIDE DISMUTASES IN THE LUNGR01HL039593 · NHLBI · UNIVERSITY OF FLORIDA · PI NICK, HARRY S · 1987 to 2006
$2.1M
Intramural NIH HHSNHLBI NIH HHS R01 HL039593NHLBI NIH HHS R01-HL-39593NHLBI NIH HHS R37 HL067456NHLBI NIH HHS R37-HL-067456
6 · The paper itself

Abstract

Specific control of group IVA cytosolic phospholipase A2 (cPLA2α or PLA2G4A) expression modulates arachidonic acid production, thus tightly regulating the downstream effects of pro- and anti-inflammatory eicosanoids. The significance of this pathway in human disease is apparent in a range of pathologies from inflammation to tumorigenesis. While much of the regulation of cPLA2α has focused on posttranslational phosphorylation of the protein, studies on transcriptional regulation of this gene have focused only on proximal promoter regions. We have identified a DNase I hypersensitive site encompassing a 5' distal enhancer element containing a highly conserved consensus AP-1 site involved in transcriptional activation of cPLA2α by interleukin (IL)-1β. Chromatin immunoprecipitation (ChIP), knockdown, knockout, and overexpression analyses have shown that c-Jun acts both in a negative and positive regulatory role. Transcriptional activation of cPLA2α occurs through the phosphorylation of c-Jun in conjunction with increased association of C/EBPβ with the distal novel enhancer. The association of C/EBPβ with the transcriptional activation complex does not require an obvious DNA binding site. These data provide new and important contributions to the understanding of cPLA2α regulation at the transcriptional level, with implications for eicosanoid metabolism, cellular signaling, and disease pathogenesis.

Indexed as

Gene Expression RegulationCells, CulturedCytokinesEnhancer Elements, GeneticGroup IV Phospholipases A2HumansReal-Time Polymerase Chain ReactionCytokinesGroup IV Phospholipases A2PLA2G4A protein, humanCCAAT/enhancer-binding protein βc-Jungene regulationgroup IVA phospholipase A2

Identifiers

PMID23549331
PMCPMC3679393
OpenAlexW2171728862

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.