Evidence map›Paper›PMID 23547652›Full record

ArticleJournal of medicinal chemistry2013

3-Hydroxypyridin-2-thione as novel zinc binding group for selective histone deacetylase inhibition.

Vishal Patil, Quaovi H Sodji, James R Kornacki, Milan Mrksich, Adegboyega K Oyelere

Open access · greenAbstract read
In one paragraph

Article in Journal of medicinal chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 72 citations in OpenAlex.

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  15. Zinc binding groups for histone deacetylase inhibitors.Journal of enzyme inhibition and medicinal chemistry · 2018
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Vishal PatilSchool of Chemistry and Biochemistry, Georgia Institute of Technology , Atlanta, Georgia 30332-0400, United States.
Quaovi H Sodji
James R Kornacki
Milan Mrksich
Adegboyega K Oyelere
Georgia Institute of Technology · USHoward Hughes Medical Institute · US

Funding

Nonpeptide macrocyclic histone deacetylase (HDAC) inhibitors for targeted lung caR01CA131217 · NCI · GEORGIA INSTITUTE OF TECHNOLOGY · PI OYELERE, ADEGBOYEGA · 2009 to 2013
$1.5M
Peptide Arrays for Understanding Histone BiochemistryR01GM084188 · NIGMS · UNIVERSITY OF CHICAGO · PI MRKSICH, MILAN · 2008 to 2011
$1.2M
NCI NIH HHS R01 CA131217NCI NIH HHS R01CA131217NIGMS NIH HHS R01 GM084188NIGMS NIH HHS R01GM084188
6 · The paper itself

Abstract

Small molecules bearing hydroxamic acid as the zinc binding group (ZBG) have been the most effective histone deacetylase inhibitors (HDACi) to date. However, concerns about the pharmacokinetic liabilities of the hydroxamic acid moiety have stimulated research efforts aimed at finding alternative nonhydroxamate ZBGs. We have identified 3-hydroxypyridin-2-thione (3-HPT) as a novel ZBG that is compatible with HDAC inhibition. 3-HPT inhibits HDAC 6 and HDAC 8 with an IC50 of 681 and 3675 nM, respectively. Remarkably, 3-HPT gives no inhibition of HDAC 1. Subsequent optimization led to several novel 3HPT-based HDACi that are selective for HDAC 6 and HDAC 8. Furthermore, a subset of these inhibitors induces apoptosis in various cancer cell lines.

Indexed as

ApoptosisCell Line, TumorCell ProliferationHistone Deacetylase InhibitorsHistone DeacetylasesHumansIntracellular SpaceMolecular Docking SimulationProtein ConformationPyridinesPyridonesStructure-Activity RelationshipSubstrate SpecificityThionesZinc3-hydroxypyridin-2-oneHistone Deacetylase InhibitorsHistone DeacetylasesPyridinesPyridonesThionesZinc

Identifiers

PMID23547652
PMCPMC3657749
OpenAlexW1965783758

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.