Evidence map›Paper›PMID 23545117›Full record

ArticleBiochimica et biophysica acta2013

Genome wide array analysis indicates that an amyotrophic lateral sclerosis mutation of FUS causes an early increase of CAMK2N2 in vitro.

Paolo Convertini, Jiayu Zhang, Pierre de la Grange, Lawrence J Hayward, Haining Zhu, Stefan Stamm

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
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  4. Article
  5. Article
  6. Review
  7. Self-assembled FUS binds active chromatin and regulates gene transcription.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Paolo ConvertiniDepartment of Molecular and Cellular Biochemistry, College of Medicine, University of Kentucky, 741 South Limestone, Lexington, KY 40536-0509, USA.
Jiayu Zhang
Pierre de la Grange
Lawrence J Hayward
Haining Zhu
Stefan Stamm
University of Kentucky · USHôpital Saint-Louis · FRUniversity of Massachusetts Chan Medical School · US

Funding

UNDERSTANDING THE MOLECULAR BASIS OF EPIGENETIC TRANSCRIPTIONAL SILENCINGP20RR020171 · NCRR · UNIVERSITY OF KENTUCKY · PI LOUIS HERSH, LOUIS HERSH LOUIS HERSH · 2004 to 2011
$16.5M
Role of FUS in ALSR01NS077284 · NINDS · UNIVERSITY OF KENTUCKY · PI ZHU, HAINING · 2011 to 2014
$1.3M
Regulation of alternative pre-mRNA processing by small nucleolar RNAsR01GM083187 · NIGMS · UNIVERSITY OF KENTUCKY · PI STAMM, STEFAN · 2009 to 2012
$1.1M
Transgenic Mouse Models of FUS/TLS-Mediated Amyotrophic Lateral SclerosisRC1NS068391 · NINDS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI BROWN, ROBERT H., HAYWARD, LAWRENCE J · 2009 to 2010
$1000k
NCRR NIH HHS 5P20RR020171-08NCRR NIH HHS P20 RR020171NIGMS NIH HHS R01 GM083187NINDS NIH HHS R01 NS077284
6 · The paper itself

Abstract

Mutations in the RNA binding protein FUS (fused in sarcoma) have been linked to a subset of familial amyotrophic lateral sclerosis (ALS) cases. The mutations are clustered in the C-terminal nuclear localization sequence (NLS). Various FUS mutants accumulate in the cytoplasm whereas wild-type (WT) FUS is mainly nuclear. Here we investigate the effect of one ALS causing mutant (FUS-ΔNLS, also known as R495X) on pre-mRNA splicing and RNA expression using genome wide exon-junction arrays. Using a non-neuronal stable cell line with inducible FUS expression, we detected early changes in RNA composition. In particular, mutant FUS-ΔNLS increased calcium/calmodulin-dependent protein kinase II inhibitor 2 (CAMK2N2) at both mRNA and protein levels, whereas WT-FUS had no effect. Chromatin immunoprecipitation experiments showed that FUS-ΔNLS accumulated at the CAMK2N2 promoter region, whereas promoter occupation by WT-FUS remained constant. Given the loss of FUS-ΔNLS in the nucleus through the mutation-induced translocation, this increase of promoter occupancy is surprising. It indicates that, despite the obvious cytoplasmic accumulation, FUS-ΔNLS can act through a nuclear gain of function mechanism.

Indexed as

MutationAmyotrophic Lateral SclerosisCalcium-Calmodulin-Dependent Protein Kinase Type 2Cell LineCell NucleusChromatinCytoplasmExonsGenome-Wide Association StudyHEK293 CellsHumansPromoter Regions, GeneticRNA-Binding Protein FUSRNA PrecursorsRNA SplicingCalcium-Calmodulin-Dependent Protein Kinase Type 2ChromatinRNA-Binding Protein FUSRNA Precursors

Identifiers

PMID23545117
PMCPMC3679306
OpenAlexW2013377534

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.