Evidence map›Paper›PMID 23544149›Full record

ArticlePloS one2013

DNA methylation program in developing hippocampus and its alteration by alcohol.

Yuanyuan Chen, Nail Can Ozturk, Feng C Zhou

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed, 1 pooled it
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 1 synthesis or guideline pooled it, 106 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. Global DNA methylation patterns in Alcohol Use Disorder.Genetics and molecular biology · 2024
    Article
  10. Article
  11. Review
  12. DNA Methylation in Alcohol Use Disorder.International journal of molecular sciences · 2023
    Review
  13. Mitigating the detrimental developmental impact of early fetal alcohol exposure using a maternal methyl donor-enriched diet.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2023
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. NFrontiers in genetics · 2021
    Article
  20. Review

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Yuanyuan ChenDepartment of Anatomy and Cell Biology, Indiana University School of Medicine, Indianapolis, Indiana, United States of America.
Nail Can Ozturk
Feng C Zhou
Indiana University – Purdue University Indianapolis · USIndiana University School of MedicineMersin Üniversitesi · TR

Funding

RAT RESEARCH COMPONENTP50AA007611 · NIAAA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI LUMENG, LAWRENCE · 1987 to 2002
$5.3M
Epigenetics of fetal alcohol syndromeR01AA016698 · NIAAA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI ZHOU, FENG C. · 2006 to 2009
$1.1M
NIAAA NIH HHS AA016698NIAAA NIH HHS P50 AA007611NIAAA NIH HHS P50 AA07611NIAAA NIH HHS R01 AA016698
6 · The paper itself

Abstract

During hippocampal development, the Cornus Ammonis (CA) and the dentate gyrus (DG) undergo waves of neurogenesis and neuronal migration and maturation independently. This stage is widely known to be vulnerable to environmental stresses, but its underlying mechanism is unclear. Alcohol exposure has been shown to alter the expression of genes that regulate the fate, survival, migration and differentiation of pyramidal and granule cells. Undermining this process might compromise hippocampal development underlying the learning and memory deficits known in Fetal Alcohol Spectrum Disorders (FASD). We have previously demonstrated that DNA methylation was programmed along with neural tube development. Here, we demonstrated that DNA methylation program (DMP) proceeded along with hippocampal neuronal differentiation and maturation, and how this DMP was affected by fetal alcohol exposure. C57BL/6 mice were treated with 4% v/v ethanol through a liquid diet along with pair-fed and chow-fed controls from gestation day (E) 7 to E16. We found that a characteristic DMP, including 5-methylcytidine (5mC), 5-hydroxylmethylcytidine (5hmC) and their binding proteins, led the hippocampal neuronal differentiation and maturation spatiotemporally as indicated by their phenotypic marks in the CA and DG pre- and post-natally. Alcohol hindered the acquisition and progression of methylation marks, and altered the chromatin translocation of these marks in the nucleus, which was correlated with developmental retardation.

Indexed as

DNA MethylationAnimalsBiomarkersBody WeightCell DifferentiationCell ProliferationCytidineDentate GyrusDNA-Binding ProteinsEthanolFemaleHippocampusMiceMice, Inbred C57BLNerve Tissue ProteinsNeurons5-methylcytidineBiomarkersCytidineDNA-Binding ProteinsEthanolNerve Tissue ProteinsNeuN protein, mouseNuclear Proteins

Identifiers

PMID23544149
PMCPMC3609790
OpenAlexW2085148653

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.