Evidence map›Paper›PMID 23543321›Full record

ArticlePlant molecular biology2013

RNAi silencing of three homologues of S-adenosylmethionine decarboxylase gene in tapetal tissue of tomato results in male sterility.

Ranjita Sinha, Manchikatla Venkat Rajam

Abstract read
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In one paragraph

Article in Plant molecular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
6.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. B-class MADS-box TM6 is a candidate gene for tomato male sterile-15TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
  5. Article
  6. Article
  7. RNAi-mediated silencing of spermidine synthase gene results in reduced reproductive potential in tobacco.Physiology and molecular biology of plants : an international journal of functional plant biology · 2018
    Article
  8. Article
  9. Article
  10. Molecular cloning and characterization ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2017
    Article
  11. Review
  12. Article
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Ranjita SinhaPlant Polyamine, Transgenic and RNAi Laboratory, Department of Genetics, University of Delhi, South Campus, Benito Juarez Road, New Delhi, 110021, India.
Manchikatla Venkat Rajam
University of Delhi · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polyamines play very important role in various cellular metabolic functions, including floral induction, floral differentiation and fertility regulation. In the present study, S-adenosylmethionine decarboxylase (SAMDC), a key gene involved in polyamine biosynthesis, has been targeted in tapetal tissue of tomato using RNAi to examine its effect on tapetum development and pollen viability. The target SAMDC gene fragments of three homologues were cloned in a hairpin RNA construct under the control of tapetal-specific A9 promoter, which was used to generate several RNAi tomato plants. These RNAi lines expressed the intended small interfering RNAs in the anther and showed the aborted and sterile pollen exhibiting shrunken and distorted morphology. These RNAi tomato plants having sterile pollen, failed to set fruits but female fertility of the plants remained unaffected as cross pollination resulted in fruit setting. Expression profiling of SAMDC genes showed considerable decrease in transcripts of SAMDC1 (5-8 fold) and SAMDC2 and SAMDC3 (2-3 fold) in the anthers of RNAi plants. The other polyamine biosynthesis genes, ADC and SPDSYN exhibited ~1.5 fold decrease in their transcript levels. Presence of siRNA molecules specific to SAMDC homologues in anther and tapetal-specific activity of A9 promoter as shown with GUS reporter system of RNAi plants suggested down-regulation of the target genes in tapetum by RNAi. These observations indicate the importance of SAMDC, in turn polyamines in pollen development, and thus tapetum-specific down-regulation of SAMDC genes using RNAi can be used for developing male sterile plants.

Indexed as

RNA InterferenceAdenosylmethionine DecarboxylaseArabidopsisBase SequenceDown-RegulationGene Expression Regulation, PlantGenes, PlantPlant InfertilityPlants, Genetically ModifiedPollenPolyaminesPromoter Regions, GeneticRNA, MessengerRNA, Small InterferingSequence Homology, Amino AcidSolanum lycopersicumAdenosylmethionine DecarboxylasePolyaminesRNA, MessengerRNA, Small Interfering

Identifiers

PMID23543321
OpenAlexW2102223613

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.