Evidence map›Paper›PMID 23543049›Full record

ArticleClinical and experimental nephrology2013

Replication study for the association of 3 SNP loci identified in a genome-wide association study for diabetic nephropathy in European type 1 diabetes with diabetic nephropathy in Japanese patients with type 2 diabetes.

Shiro Maeda, Minako Imamura, Mahiro Kurashige, Shinichi Araki, Daisuke Suzuki, Tetsuya Babazono, Takashi Uzu, Tomoya Umezono, Masao Toyoda, Koichi Kawai and 5 more

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Article in Clinical and experimental nephrology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Genetic variants ofFrontiers in endocrinology · 2023
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  6. Article
  7. Article
  8. Leptin Receptor-DeficientFrontiers in nutrition · 2021
    Article
  9. Review
  10. ErbB4 deletion predisposes to development of metabolic syndrome in mice.American journal of physiology. Endocrinology and metabolism · 2018
    Article
  11. ErbB4 deletion accelerates renal fibrosis following renal injury.American journal of physiology. Renal physiology · 2018
    Article
  12. Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 1 country.

Shiro MaedaLaboratory for Endocrinology and Metabolism, RIKEN Center for Genomic Medicine, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan, smaeda@src.riken.jp.
Minako Imamura
Mahiro Kurashige
Shinichi Araki
Daisuke Suzuki
Tetsuya Babazono
Takashi Uzu
Tomoya Umezono
Masao Toyoda
Koichi Kawai
Masahito Imanishi
Kazushige Hanaoka
Hiroshi Maegawa
Yasuko Uchigata
Tatsuo Hosoya
Jikei University School of Medicine · JPShiga University of Medical Science · JPTokai University · JPRIKEN Center for Integrative Medical Sciences · JPTokyo Women's Medical University · JPOsaka City General Hospital · JPTsukuba Medical Center Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundA recent genome-wide association study for diabetic nephropathy in European type 1 diabetes identified 3 candidate loci for diabetic nephropathy. In this study, we examined the association of the 3 single nucleotide polymorphism (SNP) loci with susceptibility to diabetic nephropathy in Japanese subjects with type 2 diabetes.

methodsWe genotyped 3 SNPs, rs7583877 in AFF3, rs12437854 in the RGMA-MCTP2 locus and rs7588550 in ERBB4, for 2,300 Japanese patients with type 2 diabetes [initial study, 1,055 nephropathy cases with overt proteinuria or with end-stage renal disease (ESRD) and 1,245 control patients with normoalbuminuria]. The association of these SNPs with diabetic nephropathy was examined by using a logistic regression analysis.

resultsWe observed a significant association of rs7588550 in ERBB4 with diabetic nephropathy in the Japanese patients with type 2 diabetes, although the effect direction was not consistent with that in the European study [p = 0.0126, odds ratio (OR) = 0.79, 95 % confidence interval (CI): 0.65-0.95]. We further examined the association of rs7588550 with diabetic nephropathy in an independent Japanese cohort (596 nephropathy cases and 311 controls) and observed the same trend of the association with the initial study. We did not observe any association of the remaining 2 SNP loci with diabetic nephropathy in the present Japanese sample.

conclusionThe association of SNP loci derived from GWAS in European type 1 diabetes with diabetic nephropathy was not replicated in the Japanese patients with type 2 diabetes, although the ERBB4 locus may have some effect also in Japanese type 2 diabetes.

Indexed as

AgedAsian PeopleDiabetes Mellitus, Type 1Diabetes Mellitus, Type 2Diabetic NephropathiesErbB ReceptorsFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyGPI-Linked ProteinsHumansKidney Failure, ChronicMaleMiddle AgedNerve Tissue ProteinsNuclear ProteinsAFF3 protein, humanERBB4 protein, humanErbB ReceptorsGPI-Linked ProteinsNerve Tissue ProteinsNuclear ProteinsReceptor, ErbB-4RGMA protein, human

Identifiers

PMID23543049
OpenAlexW2072145602

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.