Evidence map›Paper›PMID 23542902›Full record

ArticleNature nanotechnology2013

Activation of different split functionalities on re-association of RNA-DNA hybrids.

Kirill A Afonin, Mathias Viard, Angelica N Martins, Stephen J Lockett, Anna E Maciag, Eric O Freed, Eliahu Heldman, Luc Jaeger, Robert Blumenthal, Bruce A Shapiro

Abstract read
In one paragraph

Article in Nature nanotechnology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed.

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  12. Programmable DNA-augmented hydrogels for controlled activation of human lymphocytes.Nanomedicine : nanotechnology, biology, and medicine · 2021
    Article
  13. Article
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  15. Article
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  19. Exosome mediated delivery of functional nucleic acid nanoparticles (NANPs).Nanomedicine : nanotechnology, biology, and medicine · 2020
    Article
  20. Article

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Kirill A AfoninCenter for Cancer Research Nanobiology Program, NCI, Frederick, Maryland 21702, USA.
Mathias Viard
Angelica N Martins
Stephen J Lockett
Anna E Maciag
Eric O Freed
Eliahu Heldman
Luc Jaeger
Robert Blumenthal
Bruce A Shapiro

Funding

Computational RNA NanodesignZIABC011061 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SHAPIRO, BRUCE · 2009 to 2021
$12.3M
Retroviral Gag Trafficking, Env Incorporation, and Virus AssemblyZIABC010775 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI FREED, ERIC · 2009 to 2015
$4.6M
Lipid-based Nanocapsules and Triggered ChemotherapyZIABC010652 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI BLUMENTHAL, ROBERT · 2009 to 2014
$3.7M
Exploring the RNA syntax for engineering therapeutic RNA-based nano-factoriesR01GM079604 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI JAEGER, LUC · 2007 to 2011
$1.7M
CCR NIH HHS HHSN261200800001CIntramural NIH HHSNCI NIH HHS HHSN261200800001ENIGMS NIH HHS R01 GM079604NIGMS NIH HHS R01GM-079604
6 · The paper itself

Abstract

Split-protein systems, an approach that relies on fragmentation of proteins with their further conditional re-association to form functional complexes, are increasingly used for various biomedical applications. This approach offers tight control of protein functions and improved detection sensitivity. Here we report a similar technique based on a pair of RNA-DNA hybrids that can be used generally for triggering different split functionalities. Individually, each hybrid is inactive but when two cognate hybrids re-associate, different functionalities are triggered inside mammalian cells. As a proof of concept, this work mainly focuses on the activation of RNA interference. However, the release of other functionalities (such as resonance energy transfer and RNA aptamer) is also shown. Furthermore, in vivo studies demonstrate a significant uptake of the hybrids by tumours together with specific gene silencing. This split-functionality approach presents a new route in the development of 'smart' nucleic acid-based nanoparticles and switches for various biomedical applications.

Indexed as

AnimalsAptamers, NucleotideCell Line, TumorDNAFluorescenceFluorescence Resonance Energy TransferGene Knockdown TechniquesGreen Fluorescent ProteinsHIV-1HumansIntracellular SpaceKineticsMiceMicroscopy, ConfocalNucleic Acid HeteroduplexesRNAAptamers, NucleotideDNAGreen Fluorescent ProteinsNucleic Acid HeteroduplexesRNARNA, Small Interfering

Identifiers

PMID23542902
PMCPMC3618561

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.