Evidence map›Paper›PMID 23542452›Full record

ArticleEnvironmental toxicology and pharmacology2013

Benzo[a]pyrene decreases global and gene specific DNA methylation during zebrafish development.

Xiefan Fang, Cammi Thornton, Brian E Scheffler, Kristine L Willett

Abstract read
In one paragraph

Article in Environmental toxicology and pharmacology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 115 citations in OpenAlex.

  1. Article
  2. Position-specific methyl substitution on benzo[a]pyrene drives AHR-dependent fin duplication in zebrafish.Toxicological sciences : an official journal of the Society of Toxicology · 2026
    Article
  3. Article
  4. Article
  5. Dynamic changes of DNA methylation induced by benzo(a)pyrene in cancer.Genes and environment : the official journal of the Japanese Environmental Mutagen Society · 2023
    Review
  6. Article
  7. Article
  8. Influence of Benzo(a)pyrene on Different Epigenetic Processes.International journal of molecular sciences · 2021
    Review
  9. Article
  10. Article
  11. Article
  12. A Review of the Functional Roles of the Zebrafish Aryl Hydrocarbon Receptors.Toxicological sciences : an official journal of the Society of Toxicology · 2020
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Developmental Effects of Cannabidiol and Δ9-Tetrahydrocannabinol in Zebrafish.Toxicological sciences : an official journal of the Society of Toxicology · 2018
    Article
  19. Article
  20. Atrazine exposure decreases the activity of DNMTs, global DNA methylation levels, and dnmt expression.Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Xiefan FangDepartment of Pharmacology and Environmental Toxicology Research Program, School of Pharmacy, University of Mississippi, University, MS 38677, United States.
Cammi Thornton
Brian E Scheffler
Kristine L Willett
University of Mississippi · USAgricultural Research Service · US

Funding

Roles of CYP1 &19 in Fundulus Steroids &PAH MetabolismR01ES012710 · NIEHS · UNIVERSITY OF MISSISSIPPI · PI WILLETT, KRISTINE L · 2004 to 2009
$1.3M
Development of a fish model for epigenetic & multigenerational contaminant effectR21ES019940 · NIEHS · UNIVERSITY OF MISSISSIPPI · PI WILLETT, KRISTINE L · 2011 to 2012
$385k
BaP-mediated reproductive and developmental toxicityR03ES018962 · NIEHS · UNIVERSITY OF MISSISSIPPI · PI WILLETT, KRISTINE L · 2010 to 2011
$138k
NIEHS NIH HHS R01 ES012710NIEHS NIH HHS R01ES012710NIEHS NIH HHS R03 ES018962NIEHS NIH HHS R03ES018962NIEHS NIH HHS R21 ES019940NIEHS NIH HHS R21ES019940
6 · The paper itself

Abstract

DNA methylation is important for gene regulation and is vulnerable to early-life exposure to environmental contaminants. We found that direct waterborne benzo[a]pyrene (BaP) exposure at 24μg/L from 2.5 to 96hpf to zebrafish embryos significantly decreased global cytosine methylation by 44.8% and promoter methylation in vasa by 17%. Consequently, vasa expression was significantly increased by 33%. In contrast, BaP exposure at environmentally relevant concentrations did not change CpG island methylation or gene expression in cancer genes such as ras-association domain family member 1 (rassf1), telomerase reverse transcriptase (tert), c-jun, and c-myca. Similarly, BaP did not change gene expression of DNA methyltransferase 1 (dnmt1) and glycine N-methyltransferase (gnmt). While total DNMT activity was not affected, GNMT enzyme activity was moderately increased. In summary, BaP is an epigenetic modifier for global and gene specific DNA methylation status in zebrafish larvae.

Indexed as

AnimalsBenzo(a)pyreneDEAD-box RNA HelicasesDNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNA MethylationEmbryo, NonmammalianGene Expression Regulation, DevelopmentalGlycine N-MethyltransferaseTeratogensZebrafishZebrafish ProteinsBenzo(a)pyreneddx4 protein, zebrafishDEAD-box RNA HelicasesDNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDnmt1 protein, zebrafishGlycine N-MethyltransferaseTeratogensZebrafish Proteins

Identifiers

PMID23542452
PMCPMC3654064
OpenAlexW2075238663

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.