ArticleMolecular genetics and genomics : MGG2013
Transcriptome-wide identification of R2R3-MYB transcription factors in barley with their boron responsive expression analysis.
Article in Molecular genetics and genomics : MGG, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.
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39 citing papers in PubMed, 130 citations in OpenAlex.
- Unlocking salt tolerance from Fertile Crescent wild barley: evolutionary and physiological mechanisms in introgressed lines.Scientific reports · 2026Article
- An integrated analysis of miRNA and mRNA expressions in soybean response to boron stress.PloS one · 2025Article
- Transcriptome-Based Identification of the SaR2R3-MYB Gene Family inPlants (Basel, Switzerland) · 2024Article
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- Transcriptome-Wide Identification and Response Pattern Analysis of theInternational journal of molecular sciences · 2023Article
- Iris lactea var. chinensis plant drought tolerance depends on the response of proline metabolism, transcription factors, transporters and the ROS-scavenging system.BMC plant biology · 2023Article
- Study of Camellia sinensis diploid and triploid leaf development mechanism based on transcriptome and leaf characteristics.PloS one · 2023Article
- Transcriptome and metabolome analyses reveal molecular mechanisms of anthocyanin-related leaf color variation in poplar (Frontiers in plant science · 2023Article
- The PeaFrontiers in genetics · 2022Article
- Genome-wide analysis and expression profiles of PdeMYB transcription factors in colored-leaf poplar (Populus deltoids).BMC plant biology · 2021Article
- AP2/ERF and R2R3-MYB family transcription factors: potential associations between temperature stress and lipid metabolism in Auxenochlorella protothecoides.Biotechnology for biofuels · 2021Article
- The Expression ofFrontiers in plant science · 2021Article
- Nitrogen and boron nutrition in grafted watermelon II: Impact on nutrient accumulation in fruit rind and flesh.PloS one · 2021Article
- Identification of Isoflavonoid Biosynthesis-Related R2R3-MYB Transcription Factors inInternational journal of genomics · 2021Article
- Engineered magnetic nanoparticles enhance chlorophyll content and growth of barley through the induction of photosystem genes.Environmental science and pollution research international · 2020Article
- Fine mapping qGL2H, a major locus controlling grain length in barley (Hordeum vulgare L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020Article
- Identification and characterization of microRNAs in phloem and xylem from ramie (Boehmeria nivea).Molecular biology reports · 2020Article
- Root Epidermal Cell Patterning Is Modulated by a Critical Residue in the WEREWOLF Transcription Factor.Plant physiology · 2019Article
- MicroRNA156 amplifies transcription factor-associated cold stress tolerance in plant cells.Molecular genetics and genomics : MGG · 2019Article
- OsmiR528 Enhances Cold Stress Tolerance by Repressing Expression of Stress Response-related Transcription Factor Genes in Plant Cells.Current genomics · 2019Article
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Authors and funding
4 authors at 3 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
MYB family of transcription factors (TF) comprises one of the largest transcription factors in plants and is represented in all eukaryotes. They include highly conserved MYB repeats (1R, R2R3, 3R, and 4R) in the N-terminus. In addition to this, they have diverse C-terminal sequences which help the protein gain wide distinct functions, such as controlling development, secondary metabolism, hormonal regulation and response to biotic and abiotic stress. Stress-responsive roles of the MYB TFs were reported for drought, salt, wounding, cold, freezing, dehydration and osmotic stresses. This study describes the identification of barley R2R3-MYB TFs including their expression analysis in tissues under control and Boron (B) toxic conditions. Conserved motifs for MYB proteins were searched into barley full-transcriptome RNA-seq data and a total of 320 protein sequences were filtered as MYB TFs in which 51 of them corresponded to R2R3 MYB TFs. Using various bioinformatics tools, their conserved domain structures, chromosomal distributions, gene duplications, comparative functional analysis, as well as phylogenetic relations with Arabidopsis thaliana, were conducted. Beside the RNA-seq data-based expression pattern analysis of 51 R2R3 MYB TFs, quantitative analysis of selected R2R3 MYB TF genes was assessed in control and B-stressed root and leaf tissues. Critical B-induced R2R3 MYB TFs were identified. It was concluded that the results would be useful for functional characterizations of R2R3-type MYB transcription factors that are possibly involved in both B stress and divergent regulation mechanisms in plants.
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