Evidence map›Paper›PMID 23538341›Full record

ArticleBlood2013

Preapoptotic protease calpain-2 is frequently suppressed in adult T-cell leukemia.

Makoto Ishihara, Natsumi Araya, Tomoo Sato, Ayako Tatsuguchi, Naomi Saichi, Atae Utsunomiya, Yusuke Nakamura, Hidewaki Nakagawa, Yoshihisa Yamano, Koji Ueda

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Article
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  5. Article
  6. A FasFrontiers in immunology · 2017
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Makoto IshiharaLaboratory for Biomarker Development, Center of Genomic Medicine, RIKEN, Tokyo, Japan.
Natsumi Araya
Tomoo Sato
Ayako Tatsuguchi
Naomi Saichi
Atae Utsunomiya
Yusuke Nakamura
Hidewaki Nakagawa
Yoshihisa Yamano
Koji Ueda
RIKEN Center for Integrative Medical Sciences · JPSt. Marianna University School of Medicine · JPImamura Hospital · JPUniversity of Chicago · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Adult T-cell leukemia (ATL) is one of the most aggressive hematologic malignancies caused by human T-lymphotropic virus type 1 (HTLV-1) infection. The prognosis of ATL is extremely poor; however, effective strategies for diagnosis and treatment have not been established. To identify novel therapeutic targets and diagnostic markers for ATL, we employed focused proteomic profiling of the CD4(+)CD25(+)CCR4(+) T-cell subpopulation in which HTLV-1-infected cells were enriched. Comprehensive quantification of 14 064 peptides and subsequent 2-step statistical analysis using 29 cases (6 uninfected controls, 5 asymptomatic carriers, 9 HTLV-1-associated myelopathy/tropical spastic paraparesis patients, 9 ATL patients) identified 91 peptide determinants that statistically classified 4 clinical groups with an accuracy rate of 92.2% by cross-validation test. Among the identified 17 classifier proteins, α-II spectrin was drastically accumulated in infected T cells derived from ATL patients, whereas its digestive protease calpain-2 (CAN2) was significantly downregulated. Further cell cycle analysis and cell growth assay revealed that rescue of CAN2 activity by overexpressing constitutively active CAN2 (Δ(19)CAN2) could induce remarkable cell death on ATL cells accompanied by reduction of α-II spectrin. These results support that proteomic profiling of HTLV-1-infected T cells could provide potential diagnostic biomarkers and an attractive resource of therapeutic targets for ATL.

Indexed as

HTLV-I InfectionsLeukemia-Lymphoma, Adult T-CellAdultApoptosisBiomarkersCalpainCD4-Positive T-LymphocytesCell CycleCell LineCell SurvivalDisease ProgressionHumansHuman T-lymphotropic virus 1ImmunophenotypingProteomicsRNA, Small InterferingBiomarkersCalpainCAPN2 protein, humanRNA, Small InterferingSpectrin

Identifiers

PMID23538341
PMCPMC3663426
OpenAlexW1983241335

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.