Evidence map›Paper›PMID 23536561›Full record

ArticleCancer research2013

Common genetic polymorphisms modify the effect of smoking on absolute risk of bladder cancer.

Montserrat Garcia-Closas, Nathaniel Rothman, Jonine D Figueroa, Ludmila Prokunina-Olsson, Summer S Han, Dalsu Baris, Eric J Jacobs, Nuria Malats, Immaculata De Vivo, Demetrius Albanes and 34 more

Registry-linked trialAbstract readComparative Study
In one paragraph

Article in Cancer research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00342875 (The New England Bladder Cancer Study), which is not on this map. Cited by 79 papers, 6 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed, 6 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00342875 completednot on this map

The New England Bladder Cancer Study

TypeobservationalSponsorNational Cancer Institute (NCI)Ran2002 to 2020Enrolled2,681ConditionsBladder Cancer
3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 6 syntheses or guidelines pooled it.

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19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

44 authors.

Montserrat Garcia-ClosasDivision of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, MD, USA. Montse.GarciaClosas@icr.ac.uk
Nathaniel Rothman
Jonine D Figueroa
Ludmila Prokunina-Olsson
Summer S Han
Dalsu Baris
Eric J Jacobs
Nuria Malats
Immaculata De Vivo
Demetrius Albanes
Mark P Purdue
Sapna Sharma
Yi-Ping Fu
Manolis Kogevinas
Zhaoming Wang
Wei Tang
Adonina Tardón
Consol Serra
Alfredo Carrato
Reina García-Closas
Josep Lloreta
Alison Johnson
Molly Schwenn
Margaret R Karagas
Alan Schned
Gerald Andriole
Robert Grubb
Amanda Black
Susan M Gapstur
Michael Thun
William Ryan Diver
Stephanie J Weinstein
Jarmo Virtamo
David J Hunter
Neil Caporaso
Maria Teresa Landi
Amy Hutchinson
Laurie Burdett
Kevin B Jacobs
Meredith Yeager
Joseph F Fraumeni
Stephen J Chanock
Debra T Silverman
Nilanjan Chatterjee

Funding

Statistical MethodsP01CA087969 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI TWOROGER, SHELLEY S · 2000 to 2019
$77.8M
Validity of Diet and Activity Measures in WomenP01CA055075 · NCI · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI WILLETT, WALTER C. · 1991 to 2009
$41.8M
Methods for Epidemiology StudiesZIACP010181 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI ALBERT, PAUL · 2009 to 2025
$34.8M
JH/CIDR Genotyping for Genome-Wide Association StudiesU01HG004438 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 2007 to 2011
$24.2M
NONMELANOMA SKIN CANCER IN NEW HAMPSHIRER01CA057494 · NCI · DARTMOUTH COLLEGE · PI KARAGAS, MARGARET RITA · 1993 to 2015
$10.9M
Genome Wide Association Coordinating CenterU01HG004446 · NHGRI · UNIVERSITY OF WASHINGTON · PI WEIR, BRUCE S. · 2007 to 2011
$6.6M
PHARMACOGENETICS OF DRUG &CARCINOGEN METABOLISMR01CA034627 · NCI · UNIVERSITY OF NORTH DAKOTA · PI HEIN, DAVID W · 1985 to 2009
$3.1M
GENETIC MARKERS OF BLADDER CANCER PROGRESSIONR01CA089715 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ALBERTSON, DONNA G · 2001 to 2012
$3.1M
U S-FINLAND STUDIES OF NUTRITION AND CANCERN01CN045165 · CN · NATIONAL PUBLIC HEALTH INSTITUTE · PI HEINONEN, OLLI P · 1985 to 1996
–
CCR NIH HHS HHSN261200800001CCCR NIH HHS N01 RC037004CCR NIH HHS N01-RC-45035Intramural NIH HHS Z99 CA999999NCI NIH HHS CA055075NCI NIH HHS CA087969NCI NIH HHS HHSN261200800001ENCI NIH HHS HHSN261201000006CNCI NIH HHS N01 CN045165NCI NIH HHS N02 CP001037NCI NIH HHS N02-CP-01037NCI NIH HHS N02 CP011015NCI NIH HHS P01 CA055075NCI NIH HHS P01 CA087969NCI NIH HHS R01 CA034627NCI NIH HHS R01 CA057494NCI NIH HHS R01 CA089715NCI NIH HHS R01- CA089715NCI NIH HHS R01- CA34627NCI NIH HHS Y99 CA999999NHGRI NIH HHS HG-06-033NHGRI NIH HHS HHSN268200782096CNHGRI NIH HHS U01 HG004438NHGRI NIH HHS U01HG004438NHGRI NIH HHS U01 HG004446NHLBI NIH HHS R01HL091172-01
6 · The paper itself

Abstract

Bladder cancer results from the combined effects of environmental and genetic factors, smoking being the strongest risk factor. Evaluating absolute risks resulting from the joint effects of smoking and genetic factors is critical to assess the public health relevance of genetic information. Analyses included up to 3,942 cases and 5,680 controls of European background in seven studies. We tested for multiplicative and additive interactions between smoking and 12 susceptibility loci, individually and combined as a polygenic risk score (PRS). Thirty-year absolute risks and risk differences by levels of the PRS were estimated for U.S. males aged 50 years. Six of 12 variants showed significant additive gene-environment interactions, most notably NAT2 (P = 7 × 10(-4)) and UGT1A6 (P = 8 × 10(-4)). The 30-year absolute risk of bladder cancer in U.S. males was 6.2% for all current smokers. This risk ranged from 2.9% for current smokers in the lowest quartile of the PRS to 9.9% for current smokers in the upper quartile. Risk difference estimates indicated that 8,200 cases would be prevented if elimination of smoking occurred in 100,000 men in the upper PRS quartile compared with 2,000 cases prevented by a similar effort in the lowest PRS quartile (P(additive) = 1 × 10(-4)). Thus, the potential impact of eliminating smoking on the number of bladder cancer cases prevented is larger for individuals at higher than lower genetic risk. Our findings could have implications for targeted prevention strategies. However, other smoking-related diseases, as well as practical and ethical considerations, need to be considered before any recommendations could be made.

Indexed as

Polymorphism, GeneticAdultAgedAged, 80 and overCarcinoma in SituCase-Control StudiesFemaleFollow-Up StudiesGene-Environment InteractionGenome-Wide Association StudyGenotypeHumansMaleMiddle AgedPrognosisProspective Studies

Identifiers

PMID23536561
PMCPMC3688270

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.