Evidence map›Paper›PMID 23536173›Full record

ArticleAntonie van Leeuwenhoek2013

High activity catechol 1,2-dioxygenase from Stenotrophomonas maltophilia strain KB2 as a useful tool in cis,cis-muconic acid production.

Urszula Guzik, Katarzyna Hupert-Kocurek, Małgorzata Sitnik, Danuta Wojcieszyńska

Open access · hybridAbstract read
In one paragraph

Article in Antonie van Leeuwenhoek, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
  2. Article
  3. EngineeringApplied and environmental microbiology · 2024
    Article
  4. Article
  5. Article
  6. Review
  7. Catechol 1,2-Dioxygenase FromFrontiers in bioengineering and biotechnology · 2021
    Article
  8. Article
  9. Comparative Genomics ofInternational journal of molecular sciences · 2020
    Article
  10. Article
  11. Article
  12. Catechol 1,2-Dioxygenase is an Analogue of Homogentisate 1,2-Dioxygenase inInternational journal of molecular sciences · 2018
    Article
  13. Review
  14. Article
  15. Article
  16. Biodegradation of alkaline lignin byBiotechnology for biofuels · 2017
    Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Urszula GuzikDepartment of Biochemistry, Faculty of Biology and Environmental Protection, University of Silesia in Katowice, Jagiellonska 28, 40-032, Katowice, Poland. urszula.guzik@us.edu.pl
Katarzyna Hupert-Kocurek
Małgorzata Sitnik
Danuta Wojcieszyńska
University of Silesia in Katowice · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This is the first report of a catechol 1,2-dioxygenase from Stenotrophomonas maltophilia strain KB2 with high activity against catechol and its methyl derivatives. This enzyme was maximally active at pH 8.0 and 40 °C and the half-life of the enzyme at this temperature was 3 h. Kinetic studies showed that the value of K m and V max was 12.8 μM and 1,218.8 U/mg of protein, respectively. During our studies on kinetic properties of the catechol 1,2-dioxygenase we observed substrate inhibition at >80 μM. The nucleotide sequence of the gene encoding the S. maltophilia strain KB2 catechol 1,2-dioxygenase has high identity with other catA genes from members of the genus Pseudomonas. The deduced 314-residue sequence of the enzyme corresponds to a protein of molecular mass 34.5 kDa. This enzyme was inhibited by competitive inhibitors (phenol derivatives) only by ca. 30 %. High tolerance against condition changes is desirable in industrial processes. Our data suggest that this enzyme could be of use as a tool in production of cis,cis-muconic acid and its derivatives.

Indexed as

Amino Acid SequenceCatechol 1,2-DioxygenaseCatecholsMolecular Sequence DataProtein Structure, TertiarySequence AlignmentSorbic AcidStenotrophomonas maltophiliaSubstrate SpecificityCatechol 1,2-DioxygenaseCatecholsmuconic acidSorbic Acid

Identifiers

PMID23536173
PMCPMC3656225
OpenAlexW1994919800

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.