Evidence map›Paper›PMID 23535838›Full record

ArticleScientific reports2013

Long-term strain improvements accumulate mutations in regulatory elements responsible for hyper-production of cellulolytic enzymes.

Guodong Liu, Lei Zhang, Yuqi Qin, Gen Zou, Zhonghai Li, Xing Yan, Xiaomin Wei, Mei Chen, Ling Chen, Kai Zheng and 18 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 110 citations in OpenAlex.

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  12. Regulation of nutrient utilization in filamentous fungi.Applied microbiology and biotechnology · 2023
    Review
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  20. Involvement ofFrontiers in microbiology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 5 institutions in 2 countries.

Guodong LiuState Key Laboratory of Microbial Technology, Shandong University, Jinan, Shandong, China.
Lei Zhang
Yuqi Qin
Gen Zou
Zhonghai Li
Xing Yan
Xiaomin Wei
Mei Chen
Ling Chen
Kai Zheng
Jun Zhang
Liang Ma
Jie Li
Rui Liu
Hai Xu
Xiaoming Bao
Xu Fang
Lushan Wang
Yaohua Zhong
Weifeng Liu
Huajun Zheng
Shengyue Wang
Chengshu Wang
Luying Xun
Guo-Ping Zhao
Tianhong Wang
Zhihua Zhou
Yinbo Qu
Shandong University · CNState Key Laboratory of Microbial TechnologyChinese Academy of Sciences · CNCenter for Excellence in Molecular Plant Sciences · CNChinese National Human Genome Center at Shanghai · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Long-term strain improvements through repeated mutagenesis and screening have generated a hyper-producer of cellulases and hemicellulases from Penicillium decumbens 114 which was isolated 30 years ago. Here, the genome of the hyper-producer P. decumbens JU-A10-T was sequenced and compared with that of the wild-type strain 114-2. Further, the transcriptomes and secretomes were compared between the strains. Selective hyper-production of cellulases and hemicellulases but not all the secreted proteins was observed in the mutant, making it a more specific producer of lignocellulolytic enzymes. Functional analysis identified that changes in several transcriptional regulatory elements played crucial roles in the cellulase hyper-producing characteristics of the mutant. Additionally, the mutant showed enhanced supply of amino acids and decreased synthesis of secondary metabolites compared with the wild-type. The results clearly point out that we can target gene regulators and promoters with minimal alterations of the genetic content but maximal effects in genetic engineering.

Indexed as

CellulasesGlycoside HydrolasesBase SequencePenicilliumPromoter Regions, GeneticSequence Analysis, DNATranscriptomeCellulasesGlycoside Hydrolaseshemicellulase

Identifiers

PMID23535838
PMCPMC3610096
OpenAlexW1981433254

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.