Evidence map›Paper›PMID 23533600›Full record

ArticlePloS one2013

CNV analysis in Tourette syndrome implicates large genomic rearrangements in COL8A1 and NRXN1.

Abhishek Nag, Elena G Bochukova, Barbara Kremeyer, Desmond D Campbell, Heike Muller, Ana V Valencia-Duarte, Julio Cardona, Isabel C Rivas, Sandra C Mesa, Mauricio Cuartas and 20 more

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Alpha-neurexins in health and disease.Frontiers in molecular neuroscience · 2025
    Review
  5. International journal of molecular sciences · 2024
    Article
  6. Article
  7. Open medicine (Warsaw, Poland) · 2024
    Review
  8. Article
  9. Molecular Landscape of Tourette's Disorder.International journal of molecular sciences · 2023
    Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Review
  15. Article
  16. Review
  17. Cross-platform validation of neurotransmitter release impairments in schizophrenia patient-derivedProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  18. Association of Rare Genetic Variants in Opioid Receptors with Tourette Syndrome.Tremor and other hyperkinetic movements (New York, N.Y.) · 2019
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors.

Abhishek NagUCL Genetics Institute, Department of Genetics, Evolution and Environment, University College London, London, United Kingdom.
Elena G Bochukova
Barbara Kremeyer
Desmond D Campbell
Heike Muller
Ana V Valencia-Duarte
Julio Cardona
Isabel C Rivas
Sandra C Mesa
Mauricio Cuartas
Jharley Garcia
Gabriel Bedoya
William Cornejo
Luis D Herrera
Roxana Romero
Eduardo Fournier
Victor I Reus
Thomas L Lowe
I Sadaf Farooqi
Tourette Syndrome Association International Consortium for Genetics
Carol A Mathews
Lauren M McGrath
Dongmei Yu
Ed Cook
Kai Wang
Jeremiah M Scharf
David L Pauls
Nelson B Freimer
Vincent Plagnol
Andrés Ruiz-Linares

Funding

A GENETIC LINKAGE STUDY OF GTSR01NS040024 · NINDS · TOURETTE SYNDROME ASSOCIATION, INC · PI PAULS, DAVID L · 2000 to 2004
$9.5M
GENETICS OF TOURETTE SYNDROMER01NS016648 · NINDS · YALE UNIVERSITY · PI PAULS, DAVID L · 1985 to 2009
$9.0M
Stuart T. Hauser Research Training Program in Biological and Social Psychiatry.T32MH016259 · NIMH · JUDGE BAKER CHILDREN'S CENTER · PI Marek Kubicki, Martha E. Shenton · 1985 to 2026
$8.4M
A Genetic Linkage Study of GTSU01NS040024 · NINDS · TOURETTE ASSOCIATION OF AMERICA, INC. · PI SCHARF, JEREMIAH M · 2007 to 2012
$8.0M
Integrative Center for Neurogenetics and Neurogenomics - OverallP30NS062691 · NINDS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI COPPOLA, GIOVANNI · 2009 to 2018
$7.4M
POPULATION GENETIC MAPPING OF TOURETTE SYNDROMER01NS037484 · NINDS · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI FREIMER, NELSON B. · 1998 to 2009
$4.0M
Translational phenomics and genomics of Gilles de la Tourette SyndromeK23MH085057 · NIMH · MASSACHUSETTS GENERAL HOSPITAL · PI SCHARF, JEREMIAH M · 2009 to 2013
$929k
MAPPING TOURETTE SYNDROME IN A POPULATION ISOLATER01NS043538 · NINDS · UNIVERSITY COLLEGE LONDON · PI RUIZ-LINARES, ANDRES · 2005 to 2008
$923k
Medical Research Council G1001158NIMH NIH HHS K23 MH085057NIMH NIH HHS MH085057NIMH NIH HHS T32 MH016259NINDS NIH HHS NS037484NINDS NIH HHS NS043538NINDS NIH HHS NS16648NINDS NIH HHS NS40024NINDS NIH HHS P30 NS062691NINDS NIH HHS R01 NS016648NINDS NIH HHS R01 NS037484NINDS NIH HHS R01 NS040024NINDS NIH HHS R01 NS043538NINDS NIH HHS U01 NS040024
6 · The paper itself

Abstract

Tourette syndrome (TS) is a neuropsychiatric disorder with a strong genetic component. However, the genetic architecture of TS remains uncertain. Copy number variation (CNV) has been shown to contribute to the genetic make-up of several neurodevelopmental conditions, including schizophrenia and autism. Here we describe CNV calls using SNP chip genotype data from an initial sample of 210 TS cases and 285 controls ascertained in two Latin American populations. After extensive quality control, we found that cases (N = 179) have a significant excess (P = 0.006) of large CNV (>500 kb) calls compared to controls (N = 234). Amongst 24 large CNVs seen only in the cases, we observed four duplications of the COL8A1 gene region. We also found two cases with ∼400 kb deletions involving NRXN1, a gene previously implicated in neurodevelopmental disorders, including TS. Follow-up using multiplex ligation-dependent probe amplification (and including 53 more TS cases) validated the CNV calls and identified additional patients with rearrangements in COL8A1 and NRXN1, but none in controls. Examination of available parents indicates that two out of three NRXN1 deletions detected in the TS cases are de-novo mutations. Our results are consistent with the proposal that rare CNVs play a role in TS aetiology and suggest a possible role for rearrangements in the COL8A1 and NRXN1 gene regions.

Indexed as

AdolescentCalcium-Binding ProteinsCell Adhesion Molecules, NeuronalChildCollagen Type IXDNA Copy Number VariationsFemaleGenetic Predisposition to DiseaseGenotypeHumansMaleNerve Tissue ProteinsNeural Cell Adhesion MoleculesPolymorphism, Single NucleotideTourette SyndromeCalcium-Binding ProteinsCell Adhesion Molecules, NeuronalCOL9A1 protein, humanCollagen Type IXNerve Tissue ProteinsNeural Cell Adhesion MoleculesNRXN1 protein, human

Identifiers

PMID23533600
PMCPMC3606459

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.