Evidence map›Paper›PMID 23533218›Full record

ArticleBMJ open2013

Survival transcriptome in the coenzyme Q10 deficiency syndrome is acquired by epigenetic modifications: a modelling study for human coenzyme Q10 deficiencies.

Daniel J M Fernández-Ayala, Ignacio Guerra, Sandra Jiménez-Gancedo, Maria V Cascajo, Angela Gavilán, Salvatore Dimauro, Michio Hirano, Paz Briones, Rafael Artuch, Rafael De Cabo and 2 more

Open access · goldAbstract read
In one paragraph

Article in BMJ open, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Identification of a newMolecular genetics and metabolism reports · 2025
    Article
  3. Prenatal and progressive coenzyme QJournal of cachexia, sarcopenia and muscle · 2024
    Article
  4. Mutations of GEMIN5 are associated with coenzyme QEuropean journal of human genetics : EJHG · 2024
    Article
  5. Article
  6. Article
  7. Review
  8. Journal of clinical medicine · 2019
    Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 4 countries.

Daniel J M Fernández-AyalaCentro Andaluz de Biología del Desarrollo (CABD-CSIC), Universidad Pablo Olavide, Seville, Spain.
Ignacio Guerra
Sandra Jiménez-Gancedo
Maria V Cascajo
Angela Gavilán
Salvatore Dimauro
Michio Hirano
Paz Briones
Rafael Artuch
Rafael De Cabo
Leonardo Salviati
Plácido Navas
Centre for Biomedical Network Research on Rare Diseases · ESInstituto de Salud Carlos III · ESColumbia University Irving Medical Center · USLeonardo (United Kingdom) · GBNational Institute on Aging · USUniversity of Padua · IT

Funding

Aging Intervention ProgramZIAAG000363 · NIA · NATIONAL INSTITUTE ON AGING · PI DE CABO, RAFAEL · 2009 to 2025
$9.0M
Calorie restriction and agingZIAAG000368 · NIA · NATIONAL INSTITUTE ON AGING · PI DE CABO, RAFAEL · 2009 to 2025
$6.9M
Aging and CR effects on the Plasma Membrane Redox SystemZIAAG000362 · NIA · NATIONAL INSTITUTE ON AGING · PI DE CABO, RAFAEL · 2009 to 2025
$5.0M
Molecular Pathogenesis of Coenzyme Q10 DeficiencyR01HD057543 · NICHD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI HIRANO, MICHIO · 2008 to 2012
$2.0M
NICHD NIH HHS R01 HD057543Telethon GGP09207
6 · The paper itself

Abstract

objectivesCoenzyme Q10 (CoQ10) deficiency syndrome is a rare condition that causes mitochondrial dysfunction and includes a variety of clinical presentations as encephalomyopathy, ataxia and renal failure. First, we sought to set up what all have in common, and then investigate why CoQ10 supplementation reverses the bioenergetics alterations in cultured cells but not all the cellular phenotypes. DESIGN MODELLING STUDY: This work models the transcriptome of human CoQ10 deficiency syndrome in primary fibroblast from patients and study the genetic response to CoQ10 treatment in these cells.

settingFour hospitals and medical centres from Spain, Italy and the USA, and two research laboratories from Spain and the USA.

participantsPrimary cells were collected from patients in the above centres. MEASUREMENTS: We characterised by microarray analysis the expression profile of fibroblasts from seven CoQ10-deficient patients (three had primary deficiency and four had a secondary form) and aged-matched controls, before and after CoQ10 supplementation. Results were validated by Q-RT-PCR. The profile of DNA (CpG) methylation was evaluated for a subset of gene with displayed altered expression.

resultsCoQ10-deficient fibroblasts (independently from the aetiology) showed a common transcriptomic profile that promotes cell survival by activating cell cycle and growth, cell stress responses and inhibiting cell death and immune responses. Energy production was supported mainly by glycolysis while CoQ10 supplementation restored oxidative phosphorylation. Expression of genes involved in cell death pathways was partially restored by treatment, while genes involved in differentiation, cell cycle and growth were not affected. Stably demethylated genes were unaffected by treatment whereas we observed restored gene expression in either non-methylated genes or those with an unchanged methylation pattern.

conclusionsCoQ10 deficiency induces a specific transcriptomic profile that promotes cell survival, which is only partially rescued by CoQ10 supplementation.

Identifiers

PMID23533218
PMCPMC3612821
OpenAlexW2140976623

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.