Evidence map›Paper›PMID 23533178›Full record

ArticleDevelopment (Cambridge, England)2013

Notch and Nodal control forkhead factor expression in the specification of multipotent progenitors in sea urchin.

Stefan C Materna, S Zachary Swartz, Joel Smith

Abstract read
In one paragraph

Article in Development (Cambridge, England), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
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  20. Germ Line Versus Soma in the Transition from Egg to Embryo.Current topics in developmental biology · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Stefan C MaternaDivision of Biology, California Institute of Technology, Pasadena, CA 91125, USA. stefan.materna@ucsf.edu
S Zachary Swartz
Joel Smith

Funding

Transcriptional Casualty in Embryonic Morphogenesis: from the Specifications GRNP01HD037105 · NICHD · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI DAVIDSON, ERIC H · 1999 to 2018
$27.1M
Regenerative Biology Center at the MBLP30GM092374 · NIGMS · MARINE BIOLOGICAL LABORATORY · PI BORISY, GARY G · 2009 to 2010
$803k
NICHD NIH HHS HD-037105NICHD NIH HHS P01 HD037105NIGMS NIH HHS 1P30GM092374-01NIGMS NIH HHS P30 GM092374
6 · The paper itself

Abstract

Indirect development, in which embryogenesis gives rise to a larval form, requires that some cells retain developmental potency until they contribute to the different tissues in the adult, including the germ line, in a later, post-embryonic phase. In sea urchins, the coelomic pouches are the major contributor to the adult, but how coelomic pouch cells (CPCs) are specified during embryogenesis is unknown. Here we identify the key signaling inputs into the CPC specification network and show that the forkhead factor foxY is the first transcription factor specifically expressed in CPC progenitors. Through dissection of its cis-regulatory apparatus we determine that the foxY expression pattern is the result of two signaling inputs: first, Delta/Notch signaling activates foxY in CPC progenitors; second, Nodal signaling restricts its expression to the left side, where the adult rudiment will form, through direct repression by the Nodal target pitx2. A third signal, Hedgehog, is required for coelomic pouch morphogenesis and institution of laterality, but does not directly affect foxY transcription. Knockdown of foxY results in a failure to form coelomic pouches and disrupts the expression of virtually all transcription factors known to be expressed in this cell type. Our experiments place foxY at the top of the regulatory hierarchy underlying the specification of a cell type that maintains developmental potency.

Indexed as

AnimalsFluorescent Antibody TechniqueForkhead Transcription FactorsGene Expression Regulation, DevelopmentalHedgehog ProteinsIn Situ HybridizationMorphogenesisMorpholinosMultipotent Stem CellsNodal ProteinPhalloidineReceptors, NotchStrongylocentrotus purpuratusForkhead Transcription FactorsHedgehog ProteinsMorpholinosNodal ProteinPhalloidineReceptors, Notch

Identifiers

PMID23533178
PMCPMC3621494

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.