Evidence map›Paper›PMID 23532838›Full record

ArticleThe Journal of biological chemistry2013

Structure and activity of the flagellar rotor protein FliY: a member of the CheC phosphatase family.

Ria Sircar, Anna R Greenswag, Alexandrine M Bilwes, Gabriela Gonzalez-Bonet, Brian R Crane

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Article
  2. Article
  3. Parallel genetic adaptation ofMicrobial genomics · 2023
    Article
  4. Article
  5. Article
  6. Review
  7. Specific Features of the Proteomic Response of Thermophilic BacteriumInternational journal of molecular sciences · 2022
    Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Structure of the archaeal chemotaxis protein CheY in a domain-swapped dimeric conformation.Acta crystallographica. Section F, Structural biology communications · 2019
    Article
  14. Article
  15. One Basic Blueprint, Many Different Motors.Journal of bacteriology · 2019
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Ria SircarDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14850, USA.
Anna R Greenswag
Alexandrine M Bilwes
Gabriela Gonzalez-Bonet
Brian R Crane

Funding

Structure and Mechanism of the Flagellar Switch ComplexR01GM064664 · NIGMS · UNIVERSITY OF UTAH · PI BLAIR, DAVID F., CRANE, BRIAN R · 2003 to 2017
$4.1M
NIGMS NIH HHS GM064664NIGMS NIH HHS R01 GM064664
6 · The paper itself

Abstract

backgroundFliY is a flagellar rotor protein of the CheC phosphatase family.

resultsThe FliY structure resembles that of the rotor protein FliM but contains two active centers for CheY dephosphorylation.

conclusionFliY incorporates properties of the FliM/FliN rotor proteins and the CheC/CheX phosphatases to serve multiple functions in the flagellar switch. SIGNIFICANCE: FliY distinguishes flagellar architecture and function in different types of bacteria. Rotating flagella propel bacteria toward favorable environments. Sense of rotation is determined by the intracellular response regulator CheY, which when phosphorylated (CheY-P) interacts directly with the flagellar motor. In many different types of bacteria, the CheC/CheX/FliY (CXY) family of phosphatases terminates the CheY-P signal. Unlike CheC and CheX, FliY is localized in the flagellar switch complex, which also contains the stator-coupling protein FliG and the target of CheY-P, FliM. The 2.5 Å resolution crystal structure of the FliY catalytic domain from Thermotoga maritima bears strong resemblance to the middle domain of FliM. Regions of FliM that mediate contacts within the rotor compose the phosphatase active sites in FliY. Despite the similarity between FliY and FliM, FliY does not bind FliG and thus is unlikely to be a substitute for FliM in the center of the switch complex. Solution studies indicate that FliY dimerizes through its C-terminal domains, which resemble the Escherichia coli switch complex component FliN. FliY differs topologically from the E. coli chemotaxis phosphatase CheZ but appears to utilize similar structural motifs for CheY dephosphorylation in close analogy to CheX. Recognition properties and phosphatase activities of site-directed mutants identify two pseudosymmetric active sites in FliY (Glu(35)/Asn(38) and Glu(132)/Asn(135)), with the second site (Glu(132)/Asn(135)) being more active. A putative N-terminal CheY binding domain conserved with FliM is not required for binding CheY-P or phosphatase activity.

Indexed as

Bacterial ProteinsCrystallography, X-RayFlagellaMembrane ProteinsModels, MolecularPhosphoric Monoester HydrolasesPhosphorylationProtein BindingProtein Processing, Post-TranslationalProtein Structure, QuaternaryProtein Structure, SecondaryProtein Structure, TertiaryThermotoga maritimaBacterial ProteinsFliY protein, BacteriaMembrane ProteinsPhosphoric Monoester HydrolasesBacterial Protein PhosphatasesBacterial Signal TransductionCell MotilityChemotaxisFlagella RotorProtein-protein InteractionsX-ray Crystallography

Identifiers

PMID23532838
PMCPMC3650386

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.