Evidence map›Paper›PMID 23531825›Full record

ArticleThe Journal of experimental biology2013

Role of oxygen consumption in hypoxia protection by translation factor depletion.

Barbara Scott, Chun-Ling Sun, Xianrong Mao, Cong Yu, Bhupinder P S Vohra, Jeffrey Milbrandt, C Michael Crowder

Abstract read
In one paragraph

Article in The Journal of experimental biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Barbara ScottDepartment of Anesthesiology, Washington University School of Medicine, St Louis, MO 63110, USA.
Chun-Ling Sun
Xianrong Mao
Cong Yu
Bhupinder P S Vohra
Jeffrey Milbrandt
C Michael Crowder
Washington University in St. Louis · US

Funding

PHYSIOLOGY AND GENETICS OF THE GDNF HOMOLOG NEURTURINR01AG013730 · NIA · WASHINGTON UNIVERSITY · PI JEFFREY D MILBRANDT · 1996 to 2026
$10.6M
GENETIC ANALYSIS OF HYPOXIC DEATH IN C ELEGANSR01NS045905 · NINDS · WASHINGTON UNIVERSITY · PI CROWDER, C. MICHAEL · 2004 to 2016
$4.4M
Regulation of axonal degeneration by the DLK kinaseR37NS065053 · NINDS · WASHINGTON UNIVERSITY · PI Aaron Diantonio · 2020 to 2026
$4.3M
REGULATION OF AXONAL DEGENERATION BY THE DLK KINASER01NS065053 · NINDS · WASHINGTON UNIVERSITY · PI DIANTONIO, AARON · 2010 to 2019
$3.3M
IDENTIFICATION OF AXONAL DEGENERATION PATHWAYSR01NS078007 · NINDS · WASHINGTON UNIVERSITY · PI DIANTONIO, AARON, MILBRANDT, JEFFREY D · 2012 to 2014
$1.8M
GENETIC ANALYSIS OF HYPOXIC CELL DEATH IN C. ELEGANSR56NS045905 · NINDS · WASHINGTON UNIVERSITY · PI CROWDER, C. MICHAEL · 2011 to 2011
$380k
NIA NIH HHS AG0113730NIA NIH HHS R01 AG013730NINDS NIH HHS NS045905NINDS NIH HHS NS055905NINDS NIH HHS NS065053NINDS NIH HHS NS078007NINDS NIH HHS R01 NS045905NINDS NIH HHS R01 NS065053NINDS NIH HHS R01 NS078007NINDS NIH HHS R37 NS065053NINDS NIH HHS R56 NS045905
6 · The paper itself

Abstract

The reduction of protein synthesis has been associated with resistance to hypoxic cell death. Which components of the translation machinery control hypoxic sensitivity and the precise mechanism has not been systematically investigated, although a reduction in oxygen consumption has been widely assumed to be the mechanism. Using genetic reagents in Caenorhabditis elegans, we examined the effect on organismal survival after hypoxia of knockdown of 10 factors functioning at the three principal steps in translation. Reduction-of-function of all 10 translation factors significantly increased hypoxic survival to varying degrees, not fully accounted for by the level of translational suppression. Measurement of oxygen consumption showed that strong hypoxia resistance was possible without a significant decrease in oxygen consumption. Hypoxic sensitivity had no correlation with lifespan or reactive oxygen species sensitivity, two phenotypes associated with reduced translation. Resistance to tunicamycin, which produces misfolded protein toxicity, was the only phenotype that significantly correlated with hypoxic sensitivity. Translation factor knockdown was also hypoxia protective for mouse primary neurons. These data show that translation factor knockdown is hypoxia protective in both C. elegans and mouse neurons and that oxygen consumption does not necessarily determine survival; rather, mitigation of misfolded protein toxicity is more strongly associated with hypoxic protection.

Indexed as

Oxygen ConsumptionAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsCell HypoxiaCells, CulturedEukaryotic Initiation FactorsGene Knockdown TechniquesHippocampusLentivirusMiceNeuronsPolymerase Chain ReactionRNA InterferenceTransfectionTunicamycinCaenorhabditis elegans ProteinsEukaryotic Initiation FactorsTunicamycinC. eleganshypoxiaischemiatranslation factors

Identifiers

PMID23531825
PMCPMC3667128
OpenAlexW2170436273

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.