Evidence map›Paper›PMID 23531693›Full record

ArticlePlant signaling & behavior2013

A PHD in histone language: on the role of histone methylation in plant responses to phosphate deficiency.

Nulu Naga Prafulla Chandrika, Kalaipandian Sundaravelpandian, Wolfgang Schmidt

Open access · bronzeAbstract read
In one paragraph

Article in Plant signaling & behavior, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.4field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
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  10. Article
  11. PHDs govern plant development.Plant signaling & behavior · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 3 countries.

Nulu Naga Prafulla ChandrikaMolecular and Cell Biology; Taiwan International Graduate Program; Academia Sinica; Graduate Institute of Life Sciences; National Defense Medical Center; Taipei, Taiwan; Institute of Plant and Microbial Biology; Academia Sinica; Taipei, Taiwan.
Kalaipandian Sundaravelpandian
Wolfgang Schmidt
Academia Sinica · TWInstitute of Molecular and Cell Biology · RUNational Chung Hsing University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Post-translational modifications of core histones are important for various DNA-templated processes such as transcription and repair. We recently reported that the ALFIN LIKE 6 (AL6) gene, identified in a forward genetic screen, is critical for phosphate deficiency-induced root hair formation and several other processes associated with the regulation of cellular phosphate homeostasis. AL6 contains a Plant Homeo Domain (PHD) finger that can bind to trimethylated lysine 4 of histone H3 (H3K4me3). Homozygous mutants defective in AL6 expression form very short root hairs under phosphate-deficient conditions, presumably caused by altered expression of putative primary and secondary down-stream targets of AL6. In this Addendum, we speculate about possible roles of AL6, H3K4 trimethylation and other chromatin modifications in the adaptation of plants to low phosphate availability.

Indexed as

ArabidopsisArabidopsis ProteinsHistonesHomeodomain ProteinsMethylationPhosphatesTranscription FactorsALFIN-LIKE 6 protein, ArabidopsisArabidopsis ProteinsHistonesHomeodomain ProteinsPhosphatesTranscription Factorschromatin modificiationshistone methylationPHD fingerphosphate deficiencyroot hairs

Identifiers

PMID23531693
PMCPMC3908967
OpenAlexW2074324556

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.