Evidence map›Paper›PMID 23531405›Full record

ArticleDiagnostic pathology2013

Validation of various adaptive threshold methods of segmentation applied to follicular lymphoma digital images stained with 3,3'-Diaminobenzidine&Haematoxylin.

Anna Korzynska, Lukasz Roszkowiak, Carlos Lopez, Ramon Bosch, Lukasz Witkowski, Marylene Lejeune

Abstract readValidation Study
In one paragraph

Article in Diagnostic pathology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
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13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

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3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Ameliorating Effect of Red Fruit (Journal of pharmacopuncture · 2025
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  7. Decision Support System for Lymphoma Classification.Current medical imaging reviews · 2017
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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Anna KorzynskaNalecz Institute of Biocybernetics and Biomedical Engineering, Ks. Trojdena 4 Str., Warsaw, Poland.
Lukasz Roszkowiak
Carlos Lopez
Ramon Bosch
Lukasz Witkowski
Marylene Lejeune

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The comparative study of the results of various segmentation methods for the digital images of the follicular lymphoma cancer tissue section is described in this paper. The sensitivity and specificity and some other parameters of the following adaptive threshold methods of segmentation: the Niblack method, the Sauvola method, the White method, the Bernsen method, the Yasuda method and the Palumbo method, are calculated. Methods are applied to three types of images constructed by extraction of the brown colour information from the artificial images synthesized based on counterpart experimentally captured images. This paper presents usefulness of the microscopic image synthesis method in evaluation as well as comparison of the image processing results. The results of thoughtful analysis of broad range of adaptive threshold methods applied to: (1) the blue channel of RGB, (2) the brown colour extracted by deconvolution and (3) the 'brown component' extracted from RGB allows to select some pairs: method and type of image for which this method is most efficient considering various criteria e.g. accuracy and precision in area detection or accuracy in number of objects detection and so on. The comparison shows that the White, the Bernsen and the Sauvola methods results are better than the results of the rest of the methods for all types of monochromatic images. All three methods segments the immunopositive nuclei with the mean accuracy of 0.9952, 0.9942 and 0.9944 respectively, when treated totally. However the best results are achieved for monochromatic image in which intensity shows brown colour map constructed by colour deconvolution algorithm. The specificity in the cases of the Bernsen and the White methods is 1 and sensitivities are: 0.74 for White and 0.91 for Bernsen methods while the Sauvola method achieves sensitivity value of 0.74 and the specificity value of 0.99. According to Bland-Altman plot the Sauvola method selected objects are segmented without undercutting the area for true positive objects but with extra false positive objects. The Sauvola and the Bernsen methods gives complementary results what will be exploited when the new method of virtual tissue slides segmentation be develop. VIRTUAL SLIDES: The virtual slides for this article can be found here: slide 1: http://diagnosticpathology.slidepath.com/dih/webViewer.php?snapshotId=13617947952577 and slide 2: http://diagnosticpathology.slidepath.com/dih/webViewer.php?snapshotId=13617948230017.

Indexed as

3,3'-DiaminobenzidineHematoxylinImage Interpretation, Computer-AssistedStaining and LabelingAlgorithmsHumansLimit of DetectionLymphoma, FollicularPattern Recognition, Automated3,3'-DiaminobenzidineHematoxylin

Identifiers

PMID23531405
PMCPMC3656801

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.