Evidence map›Paper›PMID 23530193›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Mechanism of voltage-sensitive fluorescence in a microbial rhodopsin.

Dougal Maclaurin, Veena Venkatachalam, Hohjai Lee, Adam E Cohen

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
6.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 151 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Absolute voltage mapping using dynamic photocycle control.bioRxiv : the preprint server for biology · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Fluorescence of the Retinal Chromophore in Microbial and Animal Rhodopsins.International journal of molecular sciences · 2023
    Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review

26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Dougal MaclaurinDepartment of Physics, Harvard University, Cambridge, MA 02138, USA.
Veena Venkatachalam
Hohjai Lee
Adam E Cohen
Harvard University · USPredictive Biology (United States) · US

Funding

Medical Scientist Training ProgramT32GM007753 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALENSKY, LOREN DAVID · 1985 to 2021
$50.0M
Optical sensing of voltage, pH, and small molecules using microbial rhodopsinsDP2OD007428 · OD · HARVARD UNIVERSITY · PI COHEN, ADAM EZRA · 2010 to 2010
$2.5M
Engineering Microbial Rhodopsins as Optical Voltage SensorsR01EB012498 · NIBIB · HARVARD UNIVERSITY · PI COHEN, ADAM EZRA · 2011 to 2014
$1.5M
NIBIB NIH HHS 1-R01-EB012498-01NIBIB NIH HHS R01 EB012498NIGMS NIH HHS T32 GM007753NIGMS NIH HHS T32GM07753-33NIH HHS 1-DP2-OD007428NIH HHS DP2 OD007428
6 · The paper itself

Abstract

Microbial rhodopsins were recently introduced as genetically encoded fluorescent indicators of membrane voltage. An understanding of the mechanism underlying this function would aid in the design of improved voltage indicators. We asked, what states can the protein adopt, and which states are fluorescent? How does membrane voltage affect the photostationary distribution of states? Here, we present a detailed spectroscopic characterization of Archaerhodopsin 3 (Arch). We performed fluorescence spectroscopy on Arch and its photogenerated intermediates in Escherichia coli and in single HEK293 cells under voltage-clamp conditions. These experiments probed the effects of time-dependent illumination and membrane voltage on absorption, fluorescence, membrane current, and membrane capacitance. The fluorescence of Arch arises through a sequential three-photon process. Membrane voltage modulates protonation of the Schiff base in a 13-cis photocycle intermediate (M ⇌ N equilibrium), not in the ground state as previously hypothesized. We present experimental protocols for optimized voltage imaging with Arch, and we discuss strategies for engineering improved rhodopsin-based voltage indicators.

Indexed as

AbsorptionArchaeal ProteinsElectrophysiologyEscherichia coliHEK293 CellsHumansMembrane PotentialsMicroscopy, FluorescencePatch-Clamp TechniquesProton PumpsRhodopsins, MicrobialSpectrophotometryArchaeal Proteinsarchaerhodopsin protein, ArchaeaProton PumpsRhodopsins, Microbial

Identifiers

PMID23530193
PMCPMC3625274
OpenAlexW2066757506

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.