Evidence map›Paper›PMID 23530136›Full record

ArticleThe Journal of general physiology2013

Two structural components in CNGA3 support regulation of cone CNG channels by phosphoinositides.

Gucan Dai, Changhong Peng, Chunming Liu, Michael D Varnum

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 25 citations in OpenAlex.

  1. Trial
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  7. Differential Regulation of CaInternational journal of molecular sciences · 2021
    Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Phosphoinositides regulate ion channels.Biochimica et biophysica acta · 2015
    Review
  14. Article
  15. Article
  16. Article
  17. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Gucan DaiDepartment of Integrative Physiology and Neuroscience, Washington State University, Pullman, WA 99164, USA.
Changhong Peng
Chunming Liu
Michael D Varnum
Laboratoire d’immunologie intégrative du cancer · FRWashington State University · US

Funding

GATING MECHANISMS OF RETINAL ROD CGMP-ACTIVATED CHANNELSR01EY010329 · NEI · UNIVERSITY OF WASHINGTON · PI ZAGOTTA, WILLIAM N · 1994 to 2023
$7.7M
Molecular Mechanisms of Retinal cGMP-Activated Ion ChannelsR01EY012836 · NEI · WASHINGTON STATE UNIVERSITY · PI VARNUM, MICHAEL D. · 2000 to 2012
$3.4M
NEI NIH HHS EY12836NEI NIH HHS R01 EY010329NEI NIH HHS R01 EY012836
6 · The paper itself

Abstract

Cyclic nucleotide-gated (CNG) channels in retinal photoreceptors play a crucial role in vertebrate phototransduction. The ligand sensitivity of photoreceptor CNG channels is adjusted during adaptation and in response to paracrine signals, but the mechanisms involved in channel regulation are only partly understood. Heteromeric cone CNGA3 (A3) + CNGB3 (B3) channels are inhibited by membrane phosphoinositides (PIP(n)), including phosphatidylinositol 3,4,5-triphosphate (PIP(3)) and phosphatidylinositol 4,5-bisphosphate (PIP(2)), demonstrating a decrease in apparent affinity for cyclic guanosine monophosphate (cGMP). Unlike homomeric A1 or A2 channels, A3-only channels paradoxically did not show a decrease in apparent affinity for cGMP after PIP(n) application. However, PIP(n) induced an ∼2.5-fold increase in cAMP efficacy for A3 channels. The PIP(n)-dependent change in cAMP efficacy was abolished by mutations in the C-terminal region (R643Q/R646Q) or by truncation distal to the cyclic nucleotide-binding domain (613X). In addition, A3-613X unmasked a threefold decrease in apparent cGMP affinity with PIP(n) application to homomeric channels, and this effect was dependent on conserved arginines within the N-terminal region of A3. Together, these results indicate that regulation of A3 subunits by phosphoinositides exhibits two separable components, which depend on structural elements within the N- and C-terminal regions, respectively. Furthermore, both N and C regulatory modules in A3 supported PIP(n) regulation of heteromeric A3+B3 channels. B3 subunits were not sufficient to confer PIP(n) sensitivity to heteromeric channels formed with PIP(n)-insensitive A subunits. Finally, channels formed by mixtures of PIP(n)-insensitive A3 subunits, having complementary mutations in N- and/or C-terminal regions, restored PIP(n) regulation, implying that intersubunit N-C interactions help control the phosphoinositide sensitivity of cone CNG channels.

Indexed as

Allosteric RegulationAmino Acid SequenceAnimalsBinding SitesCyclic AMPCyclic GMPCyclic Nucleotide-Gated Cation ChannelsHumansIon Channel GatingMolecular Sequence DataMutation, MissensePhosphatidylinositol 4,5-DiphosphatePhosphatidylinositol PhosphatesProtein MultimerizationProtein Structure, TertiaryProtein SubunitsCNGA3 protein, humanCNGB3 protein, humanCyclic AMPCyclic GMPCyclic Nucleotide-Gated Cation Channelsphosphatidylinositol 3,4,5-triphosphatePhosphatidylinositol 4,5-DiphosphatePhosphatidylinositol PhosphatesProtein Subunits

Identifiers

PMID23530136
PMCPMC3607822
OpenAlexW2119937643

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.