Evidence map›Paper›PMID 23527009›Full record

ArticlePloS one2013

The molecular characterization of bovine leukaemia virus isolates from Eastern Europe and Siberia and its impact on phylogeny.

Marzena Rola-Łuszczak, Aneta Pluta, Monika Olech, Irina Donnik, Maxim Petropavlovskiy, Anton Gerilovych, Irina Vinogradova, Bhudipa Choudhury, Jacek Kuźmak

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 87 citations in OpenAlex.

  1. Genetic Diversity of the BLVPathogens (Basel, Switzerland) · 2026
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  12. Molecular Characterization of thePathogens (Basel, Switzerland) · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 4 countries.

Marzena Rola-ŁuszczakDepartment of Biochemistry, National Veterinary Research Institute, Pulawy, Poland. mrolka@piwet.pulawy.pl
Aneta Pluta
Monika Olech
Irina Donnik
Maxim Petropavlovskiy
Anton Gerilovych
Irina Vinogradova
Bhudipa Choudhury
Jacek Kuźmak
National Veterinary Research Institute · PLAll-Russian Research Institute of Genetics and Farm Animal Breeding · RUAnimal and Plant Health Agency · GBNational Scientific Center "Institute of Experimental and Clinical Veterinary Medicine" · UA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent studies have shown that bovine leukemia virus (BLV) sequences can be classified into seven distinct genotypes based on full gp51 sequence. This classification was based on available sequence data that mainly represented the BLV population that is circulating in cattle from the US and South America. In order to aid with a global perspective inclusion of data from Eastern Europe is required. In this study we examined 44 BLV isolates from different geographical regions of Poland, Belarus, Ukraine, and Russia. Phylogenetic analysis based on a 444bp fragment of env gene revealed that most of isolates belonged to genotypes 4 and 7. Furthermore, we confirmed the existence of a new genotype, genotype 8, which was highly supported by phylogenetic computations. A significant number of amino acid substitutions were found in the sequences of the studied Eastern European isolates, of which 71% have not been described previously. The substitutions encompassed mainly the C-part of the CD4+ epitope, zinc binding peptide region, CD8+ T cell epitope, and overlapping linear epitope E. These observations highlight the use of sequence data to both elucidate phylogenetic relationships and the potential effect on serological detection of geographically diverse isolates.

Indexed as

Amino Acid SequenceAnimalsAntigens, ViralCattleEnzootic Bovine LeukosisEpitopesEurope, EasternGenes, envGenetic VariationGenotypeLeukemia Virus, BovineMolecular Sequence DataPhylogenySiberiaAntigens, ViralEpitopes

Identifiers

PMID23527009
PMCPMC3602460
OpenAlexW1968736329

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.