Evidence map›Paper›PMID 23525334›Full record

ArticleGenetics2013

A novel strategy for cell-autonomous gene knockdown in Caenorhabditis elegans defines a cell-specific function for the G-protein subunit GOA-1.

Kathryn N Maher, Aishwarya Swaminathan, Parth Patel, Daniel L Chase

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.1field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Decoding GNAO1 mutations usingFrontiers in cellular neuroscience · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kathryn N MaherMolecular and Cellular Biology Program, University of Massachusetts, Amherst, MA 01003, USA.
Aishwarya Swaminathan
Parth Patel
Daniel L Chase
University of Massachusetts Amherst · US

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Stable and heritable cell-specifc knock down of gene expression in C. elegansR03MH097163 · NIMH · UNIVERSITY OF MASSACHUSETTS AMHERST · PI CHASE, DANIEL L · 2012 to 2013
$146k
NIH HHS P40 OD010440NIH HHS P40-OD010440NIMH NIH HHS MH097163NIMH NIH HHS R03 MH097163
6 · The paper itself

Abstract

We developed a novel knockdown strategy to examine cell-specific gene function in Caenorhabditis elegans. In this strategy a null mutation in any gene is replaced with a genetically stable transgene that contains a wild-type copy of the gene fused to a 3' tag that targets the mRNA transcript for degradation by the host nonsense-mediated decay (NMD) machinery. In NMD-defective animals, tagged transgene mRNA is expressed at levels similar to the endogenous gene it replaced and is translated into wild-type protein that fully rescues gene function. Cell-specific activation of NMD cell autonomously knocks down transgene expression in specific cell types without affecting its expression or function in other cells of the organism. To demonstrate the utility of this system, we replaced the goa-1 gene, encoding the pan-neuronally expressed G-protein subunit GOA-1, with a degradation-tagged transgene. We then knocked down expression of the transgene from only two neurons, the hermaphrodite-specific neurons (HSNs), and showed that GOA-1 acts cell autonomously in the HSNs to inhibit egg-laying behavior.

Indexed as

AnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsGene Knockdown TechniquesGTP-Binding Protein alpha Subunits, Gi-GoNeuronsRNA, MessengerRNA StabilityTransgenesCaenorhabditis elegans ProteinsGOA-1 protein, C elegansGTP-Binding Protein alpha Subunits, Gi-GoRNA, Messengergene expressiongene knockdownnonsense-mediated decayRNA interference

Identifiers

PMID23525334
PMCPMC3664847
OpenAlexW2148810802

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.