Evidence map›Paper›PMID 23525031›Full record

ArticleAIDS (London, England)2013

HLA-A*68:02-restricted Gag-specific cytotoxic T lymphocyte responses can drive selection pressure on HIV but are subdominant and ineffective.

Henrik N Kløverpris, Anette Stryhn, Mikkel Harndahl, Jonathan M Carlson, Alasdair J Leslie, Fabian Chen, Lynn Riddell, Joseph Mulenga, Bruce D Walker, Thumbi Ndung'u and 2 more

Open access · greenAbstract read
In one paragraph

Article in AIDS (London, England), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Role of HIV-specific CD8The Journal of experimental medicine · 2017
    Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 4 countries.

Henrik N KløverprisDepartment of Paediatrics, University of Oxford, Oxford, UK. henrik.kloverpris@k-rith.org
Anette Stryhn
Mikkel Harndahl
Jonathan M Carlson
Alasdair J Leslie
Fabian Chen
Lynn Riddell
Joseph Mulenga
Bruce D Walker
Thumbi Ndung'u
Søren Buus
Philip Goulder
University of Copenhagen · DKUniversity of KwaZulu-Natal · ZAMicrosoft (United States) · USNational Health Service · GBRoyal Berkshire Hospital · GB

Funding

Optimizing CD8+ T-cell responses against C clade HIV infection in subSaharan AfriR01AI046995 · NIAID · UNIVERSITY OF OXFORD · PI GOULDER, PHILIP J · 2000 to 2014
$6.8M
NIAID NIH HHS R01 AI046995NIAID NIH HHS R01 AI46995Wellcome Trust
6 · The paper itself

Abstract

backgroundHuman leukocyte allele (HLA) class I polymorphism has the greatest impact of human genetic variation on viral load set point. A substantial part of this effect is due to the action of HLA-B and HLA-C alleles. With few exceptions the role of HLA-A molecules in immune control of HIV is unclear.

methodsWe here study HLA-A*68:02, one of the most highly prevalent HLA-A alleles in C-clade infected sub-Saharan African populations, and one that plays a prominent role in the HIV-specific CD8 T-cell responses made against the virus.

resultsWe define eight epitopes restricted by this allele and propose the peptide binding motif for HLA-A*68:02. Although one of these epitopes almost exactly overlaps an HLA-B*57-restricted epitope in Gag linked with immune control of HIV, this HLA-A*68:02-restricted Gag-TA10 response imposed only weak selection pressure on the virus and was not associated with significantly lower viral setpoint. The only HLA-A*68:02-restricted responses imposing strong selection pressure on HIV were in the flanking regions of Pol-EA8 and Pol-EA11 and within the Vpr-EV10 epitope (P  =  8 × 10). However, targeting of this latter epitope was associated with significantly higher viral loads (P  =  0.003), suggesting lack of efficacy.

conclusionThis study is consistent with previous data showing that HLA-A-restricted Gag-specific responses can impose selection pressure on HIV. In the case of HLA-A*68:02 the Gag response is subdominant, and apparently has little impact in natural infection. However, these data suggest the potential for high frequency vaccine-induced Gag responses restricted by this allele to have significant antiviral efficacy in vaccine recipients.

Indexed as

Selection, GeneticAfrica South of the SaharaCD8-Positive T-LymphocytesEpitopesgag Gene Products, Human Immunodeficiency VirusHIVHLA-A AntigensHumansNuclear Pore Complex ProteinsT-Lymphocytes, CytotoxicEpitopesgag Gene Products, Human Immunodeficiency VirusHLA-A*68 antigenHLA-A AntigensNuclear Pore Complex ProteinsNUP214 protein, human

Identifiers

PMID23525031
PMCPMC6315297
OpenAlexW2086088983

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.